myRT

myRT report for GCA_000014545.1_ASM1454v1

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Seq: CP000428.1 Lactococcus lactis subsp. cremoris SK11 plasmid 3, complete sequence (74750 bp)
Overview 1 RT 1: 20356-25818 bp Neighborhood of RT #1 [20356, 25844] HTH_XRE RVT-GII Intron_maturas2 Relaxase MobC Feature: gene Location: 20356-20880 bp Ori: ABJ74054.1 Feature: domain Description: HTH_XRE Location: 20371-20473 bp Feature: domain Description: HTH_XRE Location: 20371 -20473 bp Feature: gene Location: 21461-22165 bp Feature: gene Location: 22727-24526 bp Ori: ABJ74056.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22994-23807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22994-23807 bp Feature: domain Description: Intron_maturas2 Location: 23891-24173 bp Feature: domain Description: Intron_maturas2 Location: 23891 -241 73 bp Feature: gene Location: 25064-25471 bp Ori: ABJ74057.1 Feature: domain Description: Relaxase Location: 25121-25436 bp Feature: domain Description: Relaxase Location: 251 21 -25436 bp Feature: gene Location: 25476-25844 bp Ori: ABJ74058.1 Feature: domain Description: MobC Location: 25689-25818 bp Feature: domain Description: MobC Location: 25689-2581 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, Intron_maturas2 (pfam01348), Relaxase (pfam03432), MobC (pfam05713)

Seq: CP000425.1 Lactococcus lactis subsp. cremoris SK11, complete genome (2438589 bp)
Overview 1 RT 1: 1588169-1596343 bp Neighborhood of RT #1 [1588169, 1596351] RVT-GII Intron_maturas2 WxL Feature: gene Location: 1588169-1590232 bp Feature: gene Location: 1590297-1590389 bp Feature: gene Location: 1590970-1592769 bp Ori: ABJ73181.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1591237-1592050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15912 37-1592 050 bp Feature: domain Description: Intron_maturas2 Location: 1592134-1592416 bp Feature: domain Description: Intron_maturas2 Location: 1592 134-1592 416 bp Feature: gene Location: 1592602-1595559 bp Feature: gene Location: 1595596-1596351 bp Ori: ABJ73183.1 Feature: domain Description: WxL Location: 1595686-1596343 bp Feature: domain Description: WxL Location: 1595686-1596343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), WxL (pfam13731)