myRT

myRT report for GCA_000014625.1_ASM1462v1

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Seq: CP000438.1 Pseudomonas aeruginosa UCBPP-PA14, complete genome (6537648 bp)
Overview 1 RT 1: 638737-649042 bp Neighborhood of RT #1 [638737, 649044] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 638737-639858 bp Ori: ABJ15536.1 Feature: domain Description: COG3177 Location: 638755-639847 bp Feature: domain Description: COG31 77 Location: 638755-639847 bp Feature: gene Location: 640117-640278 bp Feature: gene Location: 640581-642266 bp Ori: ABJ15538.1 Feature: domain Description: RVT_N Location: 640638-640878 bp Feature: domain Description: RVT_N Location: 640638-640878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 640926-641562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 640926-641 562 bp Feature: domain Description: GIIM Note: maturase Location: 641616-641847 bp Feature: domain Description: GIIM Note: maturase Location: 641 61 6-641 847 bp Feature: domain Description: HNH Note: nucleases Location: 642099-642237 bp Feature: domain Description: HNH Note: nucleases Location: 642099-642237 bp Feature: gene Location: 643347-647084 bp Ori: ABJ15539.1 Feature: domain Description: PBP2_BvgS_HisK_like Location: 643455-644112 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 643455-6441 1 2 bp Feature: domain Description: PRK09776 Location: 644325-644796 bp Feature: domain Description: PRK09776 Location: 644325-644796 bp Feature: domain Description: PAS Location: 644841-645378 bp Feature: domain Description: PAS Location: 644841 -645378 bp Feature: domain Description: PRK10060 Location: 645387-647034 bp Feature: domain Description: PRK1 0060 Location: 645387-647034 bp Feature: gene Location: 647191-649044 bp Ori: ABJ15540.1 Gene: rpoD Feature: domain Description: PRK05658 Location: 647203-649042 bp Feature: domain Description: PRK05658 Location: 647203-649042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)