myRT

myRT report for GCA_000014905.1_ASM1490v1

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Seq: CP000473.1 Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome (9965640 bp)
Overview 1 RT 1: 2548666-2555329 bp 2 RT 2: 3230254-3237002 bp 3 RT 3: 4190599-4197001 bp 4 RT 4: 7980717-7985035 bp 5 RT 5: 9590403-9598092 bp Neighborhood of RT #1 [2548666, 2555478] Peptidase_M50 STKc_PknB_like RVT-GII DAP2 YXWGXW Neighborhood of RT #2 [3230254, 3237016] DUF2157 COG4872 GDYXXLXY RVT-GII GIIM acidobact_VWFA AzgA Neighborhood of RT #3 [4190599, 4197084] Phage_int_SAM_1 INT_RitC_C_like Phage_int_SAM_4 INT_IntI_C RVT-GII GIIM SGL Neighborhood of RT #4 [7980717, 7985035] HEAT YcjR RVT-Retrons Neighborhood of RT #5 [9590403, 9598283] STKc_PknB_like propeller_TolB propeller_TolB propeller_TolB RVT-GII GIIM integrase_gron integrase_gron Phage_int_SAM_1 INT_RitC_C_like Feature: gene Location: 2548666-2549778 bp Ori: ABJ83004.1 Feature: domain Description: Peptidase_M50 Location: 2548846-2549110 bp Feature: domain Description: Peptidase_M50 Location: 2548846-25491 1 0 bp Feature: gene Location: 2549940-2550299 bp Ori: ABJ83005.1 Feature: domain Description: STKc_PknB_like Location: 2550003-2550201 bp Feature: domain Description: STKc_PknB_like Location: 2550003-2550201 bp Feature: gene Location: 2550848-2552359 bp Ori: ABJ83006.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2551274-2551964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2551 274-2551 964 bp Feature: gene Location: 2552471-2555026 bp Ori: ABJ83007.1 Feature: domain Description: DAP2 Location: 2552894-2554994 bp Feature: domain Description: DAP2 Location: 2552894-2554994 bp Feature: gene Location: 2555125-2555478 bp Ori: ABJ83008.1 Feature: domain Description: YXWGXW Location: 2555254-2555329 bp Feature: domain Description: YXWGXW Location: 2555254-2555329 bp Feature: gene Location: 3230254-3231360 bp Ori: ABJ83541.1 Feature: domain Description: DUF2157 Location: 3230284-3230698 bp Feature: domain Description: DUF21 57 Location: 3230284-3230698 bp Feature: domain Description: COG4872 Location: 3231181-3231352 bp Feature: domain Description: COG4872 Location: 3231 1 81 -3231 352 bp Feature: gene Location: 3231357-3231827 bp Ori: ABJ83542.1 Feature: domain Description: GDYXXLXY Location: 3231399-3231771 bp Feature: domain Description: GDYXXLXY Location: 3231 399-3231 771 bp Feature: gene Location: 3232417-3233724 bp Ori: ABJ83543.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3232699-3233359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3232699-3233359 bp Feature: domain Description: GIIM Note: maturase Location: 3233437-3233644 bp Feature: domain Description: GIIM Note: maturase Location: 3233437-3233644 bp Feature: gene Location: 3233864-3235675 bp Ori: ABJ83544.1 Feature: domain Description: acidobact_VWFA Location: 3233966-3234707 bp Feature: domain Description: acidobact_VWFA Location: 3233966-3234707 bp Feature: gene Location: 3235694-3237016 bp Ori: ABJ83545.1 Feature: domain Description: AzgA Location: 3235721-3237002 bp Feature: domain Description: AzgA Location: 3235721 -3237002 bp Feature: gene Location: 4190599-4191597 bp Ori: ABJ84287.1 Feature: domain Description: Phage_int_SAM_1 Location: 4190644-4190893 bp Feature: domain Description: Phage_int_SAM_1 Location: 41 90644-41 90893 bp Feature: domain Description: INT_RitC_C_like Location: 4190980-4191523 bp Feature: domain Description: INT_RitC_C_like Location: 41 90980-41 91 523 bp Feature: gene Location: 4191613-4192407 bp Ori: ABJ84288.1 Feature: domain Description: Phage_int_SAM_4 Location: 4191625-4191868 bp Feature: domain Description: Phage_int_SAM_4 Location: 41 91 625-41 91 868 bp Feature: domain Description: INT_IntI_C Location: 4191907-4192336 bp Feature: domain Description: INT_IntI_C Location: 41 91 907-41 92336 bp Feature: gene Location: 4192968-4194356 bp Ori: ABJ84289.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4193313-4193931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 9331 3-41 93931 bp Feature: domain Description: GIIM Note: maturase Location: 4193982-4194198 bp Feature: domain Description: GIIM Note: maturase Location: 41 93982-41 941 98 bp Feature: gene Location: 4195520-4196158 bp Feature: gene Location: 4196221-4197084 bp Ori: ABJ84291.1 Feature: domain Description: SGL Location: 4196284-4197001 bp Feature: domain Description: SGL Location: 41 96284-41 97001 bp Feature: gene Location: 7980717-7981733 bp Ori: ABJ87288.1 Feature: domain Description: HEAT Location: 7981263-7981578 bp Feature: domain Description: HEAT Location: 7981 263-7981 578 bp Feature: gene Location: 7981800-7982711 bp Ori: ABJ87289.1 Feature: domain Description: YcjR Location: 7981980-7982688 bp Feature: domain Description: YcjR Location: 7981 980-7982688 bp Feature: gene Location: 7982696-7984039 bp Ori: ABJ87290.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7983155-7983797 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79831 55-7983797 bp Feature: gene Location: 7984242-7984556 bp Feature: gene Location: 7984562-7985035 bp Feature: gene Location: 9590403-9592940 bp Ori: ABJ88539.1 Feature: domain Description: STKc_PknB_like Location: 9590439-9591177 bp Feature: domain Description: STKc_PknB_like Location: 9590439-9591 1 77 bp Feature: domain Description: propeller_TolB Location: 9591357-9591531 bp Feature: domain Description: propeller_TolB Location: 9591 357-9591 531 bp Feature: domain Description: propeller_TolB Location: 9592155-9592392 bp Feature: domain Description: propeller_TolB Location: 95921 55-9592392 bp Feature: domain Description: propeller_TolB Location: 9592542-9592779 bp Feature: domain Description: propeller_TolB Location: 9592542-9592779 bp Feature: gene Location: 9593142-9594188 bp Feature: gene Location: 9594524-9595912 bp Ori: ABJ88541.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9594869-9595487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9594869-9595487 bp Feature: domain Description: GIIM Note: maturase Location: 9595538-9595754 bp Feature: domain Description: GIIM Note: maturase Location: 9595538-9595754 bp Feature: gene Location: 9596473-9597270 bp Ori: ABJ88542.1 Feature: domain Description: integrase_gron Location: 9596494-9597013 bp Feature: domain Description: integrase_gron Location: 9596494-959701 3 bp Feature: domain Description: integrase_gron Location: 9597079-9597199 bp Feature: domain Description: integrase_gron Location: 9597079-95971 99 bp Feature: gene Location: 9597168-9598283 bp Ori: ABJ88543.1 Feature: domain Description: Phage_int_SAM_1 Location: 9597213-9597462 bp Feature: domain Description: Phage_int_SAM_1 Location: 959721 3-9597462 bp Feature: domain Description: INT_RitC_C_like Location: 9597549-9598092 bp Feature: domain Description: INT_RitC_C_like Location: 9597549-9598092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_M50 (pfam02163), STKc_PknB_like (cd14014), RVT-GII, DAP2 (COG1506), YXWGXW (pfam12779), DUF2157 (pfam09925), COG4872 (Uncharacterized membrane protein ), GDYXXLXY (pfam14345), GIIM (pfam08388), acidobact_VWFA (TIGR03436)
AzgA (COG2252), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193), SGL (pfam08450), HEAT (sd00044), YcjR (COG1082), RVT-Retrons, propeller_TolB (TIGR02800)
integrase_gron (TIGR02249)