myRT

myRT report for GCA_000015185.1_ASM1518v1

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Seq: CP000503.1 (4708380 bp)
Overview 1 RT 1: 2765572-2771682 bp 2 RT 2: 2843046-2848059 bp Neighborhood of RT #1 [2765572, 2771690] RVT-Retrons COG2374 PKD PKD Neighborhood of RT #2 [2843046, 2848067] MPN_NLPC_P60 NLPC_P60 Phage_tail_L RVT-DGRs YfmG Phage_min_tail Feature: gene Location: 2765572-2765841 bp Feature: gene Location: 2766012-2766182 bp Feature: gene Location: 2766220-2767980 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2766376-2766997 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2766376-2766997 bp Feature: gene Location: 2768445-2768600 bp Feature: gene Location: 2768856-2771690 bp Feature: domain Description: COG2374 Location: 2768910-2771199 bp Feature: domain Description: COG2374 Location: 276891 0-2771 1 99 bp Feature: domain Description: PKD Location: 2771232-2771445 bp Feature: domain Description: PKD Location: 2771 232-2771 445 bp Feature: domain Description: PKD Location: 2771517-2771682 bp Feature: domain Description: PKD Location: 2771 51 7-2771 682 bp Feature: gene Location: 2843046-2843759 bp Feature: domain Description: MPN_NLPC_P60 Location: 2843061-2843376 bp Feature: domain Description: MPN_NLPC_P60 Location: 2843061 -2843376 bp Feature: domain Description: NLPC_P60 Location: 2843400-2843745 bp Feature: domain Description: NLPC_P60 Location: 2843400-2843745 bp Feature: gene Location: 2843811-2844536 bp Feature: domain Description: Phage_tail_L Location: 2843880-2844528 bp Feature: domain Description: Phage_tail_L Location: 2843880-2844528 bp Feature: gene Location: 2844803-2846077 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2845241-2845865 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2845241 -2845865 bp Feature: gene Location: 2846487-2847692 bp Feature: domain Description: YfmG Location: 2846925-2847249 bp Feature: domain Description: YfmG Location: 2846925-2847249 bp Feature: gene Location: 2847732-2848067 bp Feature: domain Description: Phage_min_tail Location: 2847741-2848059 bp Feature: domain Description: Phage_min_tail Location: 2847741 -2848059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG2374 (Predicted extracellular nuclease ), PKD (smart00089), MPN_NLPC_P60 (cd08073), NLPC_P60 (pfam00877), Phage_tail_L (pfam05100), RVT-DGRs, YfmG (COG1262), Phage_min_tail (pfam05939)