myRT

myRT report for GCA_000015845.1_ASM1584v1

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Seq: CP000565.1 (74000 bp)
Overview 1 RT 1: 9338-12041 bp Neighborhood of RT #1 [9338, 12041] Avd_like RVT-DGRs Feature: gene Location: 9338-9511 bp Feature: gene Location: 9513-9929 bp Feature: domain Description: Avd_like Location: 9546-9870 bp Feature: domain Description: Avd_like Location: 9546-9870 bp Feature: gene Location: 9909-11213 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 10116-10818 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 01 1 6-1 081 8 bp Feature: gene Location: 11370-11501 bp Feature: gene Location: 11514-12041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: CP000563.1 (5127376 bp)
Overview 1 RT 1: 2137056-2143059 bp 2 RT 2: 2699079-2702367 bp 3 RT 3: 2805863-2808379 bp 4 RT 4: 3670218-3674083 bp Neighborhood of RT #1 [2137056, 2143208] marine_sort_RR RVT-GII GIIM pdsO marine_srt_targ Neighborhood of RT #2 [2699079, 2702367] HTH_26 RVT_N RVT-GII GIIM Neighborhood of RT #3 [2805863, 2808379] DUF3144 RVT-GII GIIM Neighborhood of RT #4 [3670218, 3674083] DUF1852 RVT-Retrons RVT-Retrons Feature: gene Location: 2137056-2137739 bp Feature: domain Description: marine_sort_RR Location: 2137113-2137731 bp Feature: domain Description: marine_sort_RR Location: 2 137113-2 137731 bp Feature: gene Location: 2137832-2138020 bp Feature: gene Location: 2138200-2139546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2138482-2139100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 138482 -2 139100 bp Feature: domain Description: GIIM Note: maturase Location: 2139148-2139352 bp Feature: domain Description: GIIM Note: maturase Location: 2 139148-2 139352 bp Feature: gene Location: 2139957-2140787 bp Feature: domain Description: pdsO Location: 2139966-2140746 bp Feature: domain Description: pdsO Location: 2 139966-2 140746 bp Feature: gene Location: 2140893-2143208 bp Feature: domain Description: marine_srt_targ Location: 2141166-2143059 bp Feature: domain Description: marine_srt_targ Location: 2 141166-2 143059 bp Feature: gene Location: 2699079-2699294 bp Feature: gene Location: 2699422-2699631 bp Feature: domain Description: HTH_26 Location: 2699437-2699617 bp Feature: domain Description: HTH_2 6 Location: 2 699437-2 699617 bp Feature: gene Location: 2699890-2701404 bp Feature: domain Description: RVT_N Location: 2699980-2700223 bp Feature: domain Description: RVT_N Location: 2 699980-2 7002 2 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2700268-2700895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7002 68-2 700895 bp Feature: domain Description: GIIM Note: maturase Location: 2700952-2701180 bp Feature: domain Description: GIIM Note: maturase Location: 2 700952 -2 701180 bp Feature: gene Location: 2701469-2701684 bp Feature: gene Location: 2702230-2702367 bp Feature: gene Location: 2805863-2805991 bp Feature: gene Location: 2806030-2806320 bp Feature: domain Description: DUF3144 Location: 2806060-2806288 bp Feature: domain Description: DUF3144 Location: 2 806060-2 8062 88 bp Feature: gene Location: 2806430-2807776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2806712-2807330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 806712 -2 807330 bp Feature: domain Description: GIIM Note: maturase Location: 2807378-2807582 bp Feature: domain Description: GIIM Note: maturase Location: 2 807378-2 807582 bp Feature: gene Location: 2807956-2808144 bp Feature: gene Location: 2808224-2808379 bp Feature: gene Location: 3670218-3671210 bp Feature: domain Description: DUF1852 Location: 3670239-3671199 bp Feature: domain Description: DUF1852 Location: 36702 39-3671199 bp Feature: gene Location: 3671608-3671820 bp Feature: gene Location: 3672055-3672711 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3672058-3672454 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3672 058-3672 454 bp Feature: gene Location: 3672714-3672995 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3672813-3672966 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3672 813-3672 966 bp Feature: gene Location: 3673217-3673966 bp Feature: gene Location: 3673952-3674083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT marine_sort_RR (TIGR03787), RVT-GII, GIIM (pfam08388), pdsO (TIGR03789), marine_srt_targ (TIGR03788), HTH_26 (pfam13443), RVT_N (pfam13655), DUF3144 (pfam11342), DUF1852 (pfam08908), RVT-Retrons