myRT

myRT report for GCA_000016265.1_ASM1626v1

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Seq: CP000629.1 Agrobacterium radiobacter K84 chromosome 2, complete sequence (2650913 bp)
Overview 1 RT 1: 786618-792344 bp 2 RT 2: 1746728-1752445 bp 3 RT 3: 2563426-2570197 bp Neighborhood of RT #1 [786618, 792373] mob_myst_B mob_myst_A RVT-GII GIIM Tas Cytochrome_P460 Neighborhood of RT #2 [1746728, 1752501] DltE OYE_like_FMN RVT-GII GIIM Rve Crp Neighborhood of RT #3 [2563426, 2570241] DEDD_Tnp_IS110 Transposase_20 PHA02517 RVT-GII GIIM HTH_1 PBP2_CrgA_like_5 OYE_like_4_FMN Feature: gene Location: 786618-787214 bp Ori: ACM29290.1 Feature: domain Description: mob_myst_B Location: 786651-787209 bp Feature: domain Description: mob_myst_B Location: 786651 -787209 bp Feature: gene Location: 787211-787672 bp Ori: ACM29291.1 Feature: domain Description: mob_myst_A Location: 787229-787667 bp Feature: domain Description: mob_myst_A Location: 787229-787667 bp Feature: gene Location: 788666-790180 bp Ori: ACM29292.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 788924-789659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 788924-789659 bp Feature: domain Description: GIIM Note: maturase Location: 789731-789959 bp Feature: domain Description: GIIM Note: maturase Location: 789731 -789959 bp Feature: gene Location: 790697-791680 bp Ori: ACM29293.1 Feature: domain Description: Tas Location: 790847-791612 bp Feature: domain Description: Tas Location: 790847-791 61 2 bp Feature: gene Location: 791855-792373 bp Ori: ACM29294.1 Feature: domain Description: Cytochrome_P460 Location: 792059-792344 bp Feature: domain Description: Cytochrome_P460 Location: 792059-792344 bp Feature: gene Location: 1746728-1747516 bp Ori: ACM30155.1 Feature: domain Description: DltE Location: 1746743-1747490 bp Feature: domain Description: DltE Location: 1 746743-1 747490 bp Feature: gene Location: 1747650-1748732 bp Ori: ACM30156.1 Gene: nerA Feature: domain Description: OYE_like_FMN Location: 1747665-1748661 bp Feature: domain Description: OYE_like_FMN Location: 1 747665-1 748661 bp Feature: gene Location: 1749627-1750886 bp Ori: ACM30157.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1749831-1750488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 749831 -1 750488 bp Feature: domain Description: GIIM Note: maturase Location: 1750569-1750800 bp Feature: domain Description: GIIM Note: maturase Location: 1 750569-1 750800 bp Feature: gene Location: 1751063-1751410 bp Ori: ACM30158.1 Feature: domain Description: Rve Location: 1751069-1751336 bp Feature: domain Description: Rve Location: 1 751 069-1 751 336 bp Feature: gene Location: 1751809-1752501 bp Ori: ACM30159.1 Feature: domain Description: Crp Location: 1751839-1752445 bp Feature: domain Description: Crp Location: 1 751 839-1 752445 bp Feature: gene Location: 2563426-2564784 bp Ori: ACM30879.1 Feature: domain Description: DEDD_Tnp_IS110 Location: 2563483-2563909 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 2563483-2563909 bp Feature: domain Description: Transposase_20 Location: 2564308-2564557 bp Feature: domain Description: Transposase_20 Location: 2564308-2564557 bp Feature: gene Location: 2564772-2565257 bp Ori: ACM30880.1 Feature: domain Description: PHA02517 Location: 2564883-2565225 bp Feature: domain Description: PHA0251 7 Location: 2564883-2565225 bp Feature: gene Location: 2565888-2567402 bp Ori: ACM30881.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2566146-2566881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25661 46-2566881 bp Feature: domain Description: GIIM Note: maturase Location: 2566953-2567181 bp Feature: domain Description: GIIM Note: maturase Location: 2566953-25671 81 bp Feature: gene Location: 2568092-2568988 bp Ori: ACM30882.1 Feature: domain Description: HTH_1 Location: 2568116-2568287 bp Feature: domain Description: HTH_1 Location: 25681 1 6-2568287 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 2568368-2568971 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 2568368-2568971 bp Feature: gene Location: 2569105-2570241 bp Ori: ACM30883.1 Gene: nerA Feature: domain Description: OYE_like_4_FMN Location: 2569129-2570197 bp Feature: domain Description: OYE_like_4_FMN Location: 25691 29-25701 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mob_myst_B (TIGR02613), mob_myst_A (TIGR02612), RVT-GII, GIIM (pfam08388), Tas (COG0667), Cytochrome_P460 (pfam16694), DltE (COG3967), OYE_like_FMN (cd02933), Rve (COG3316), Crp (pfam00325)
DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371), PHA02517 (putative transposase OrfB; Reviewed), HTH_1 (pfam00126), PBP2_CrgA_like_5 (cd08474), OYE_like_4_FMN (cd04735)