myRT

myRT report for GCA_000016285.1_ASM1628v1

Download annotations/find similar RTs

Seq: CP000637.1 Agrobacterium vitis S4 plasmid pTiS4, complete sequence (258824 bp)
Overview 1 RT 1: 189783-199230 bp Neighborhood of RT #1 [189783, 199241] COG3547 PHA02517 RVT-GII GIIM INT_RitC_C_like DDE_3 INT_RitB_C_like Phage_int_SAM_4 INT_RitA_C_like RVT-GII InsE Feature: gene Location: 189783-190805 bp Ori: ACM39686.1 Gene: tnp Feature: domain Description: COG3547 Location: 190269-190776 bp Feature: domain Description: COG3547 Location: 1 90269-1 90776 bp Feature: gene Location: 191202-191570 bp Ori: ACM39687.1 Gene: tnp Feature: domain Description: PHA02517 Location: 191211-191478 bp Feature: domain Description: PHA0251 7 Location: 1 91 21 1 -1 91 478 bp Feature: gene Location: 191686-192522 bp Ori: ACM39688.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191689-192001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 689-1 92001 bp Feature: domain Description: GIIM Note: maturase Location: 192073-192301 bp Feature: domain Description: GIIM Note: maturase Location: 1 92073-1 92301 bp Feature: gene Location: 192645-192974 bp Ori: ACM39689.1 Feature: domain Description: INT_RitC_C_like Location: 192663-192894 bp Feature: domain Description: INT_RitC_C_like Location: 1 92663-1 92894 bp Feature: gene Location: 192978-193862 bp Ori: ACM39690.1 Feature: domain Description: DDE_3 Location: 193356-193767 bp Feature: domain Description: DDE_3 Location: 1 93356-1 93767 bp Feature: gene Location: 194813-195790 bp Ori: ACM39692.1 Feature: domain Description: INT_RitB_C_like Location: 195146-195728 bp Feature: domain Description: INT_RitB_C_like Location: 1 951 46-1 95728 bp Feature: gene Location: 195790-196767 bp Ori: ACM39693.1 Feature: domain Description: Phage_int_SAM_4 Location: 195880-196108 bp Feature: domain Description: Phage_int_SAM_4 Location: 1 95880-1 961 08 bp Feature: domain Description: INT_RitA_C_like Location: 196198-196735 bp Feature: domain Description: INT_RitA_C_like Location: 1 961 98-1 96735 bp Feature: gene Location: 197080-197853 bp Ori: ACM39694.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197353-197755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 97353-1 97755 bp Feature: gene Location: 197920-198693 bp Feature: gene Location: 198912-199241 bp Ori: ACM39696.1 Feature: domain Description: InsE Location: 198918-199230 bp Feature: domain Description: InsE Location: 1 9891 8-1 99230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), INT_RitC_C_like (cd01182), DDE_3 (pfam13358), INT_RitB_C_like (cd00797), Phage_int_SAM_4 (pfam13495), INT_RitA_C_like (cd01188), InsE (COG2963)