myRT

myRT report for GCA_000016425.1_ASM1642v1

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Seq: CP000667.1 Salinispora tropica CNB-440, complete genome (5183331 bp)
Overview 1 RT 1: 4704819-4712453 bp Neighborhood of RT #1 [4704819, 4712491] PinE COG3464 COG3464 RVT-GII GIIM COG3293 COG3293 rve Feature: gene Location: 4704819-4705493 bp Ori: ABP56566.1 Feature: domain Description: PinE Location: 4704909-4705485 bp Feature: domain Description: PinE Location: 4704909-4705485 bp Feature: gene Location: 4705943-4707478 bp Ori: ABP56567.1 Feature: domain Description: COG3464 Location: 4706036-4706684 bp Feature: domain Description: COG3464 Location: 4706036-4706684 bp Feature: domain Description: COG3464 Location: 4707110-4707476 bp Feature: domain Description: COG3464 Location: 47071 1 0-4707476 bp Feature: gene Location: 4707627-4709093 bp Ori: ABP56568.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4707963-4708659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4707963-4708659 bp Feature: domain Description: GIIM Note: maturase Location: 4708728-4708944 bp Feature: domain Description: GIIM Note: maturase Location: 4708728-4708944 bp Feature: gene Location: 4709595-4710458 bp Ori: ABP56569.1 Feature: domain Description: COG3293 Location: 4709616-4709961 bp Feature: domain Description: COG3293 Location: 470961 6-4709961 bp Feature: domain Description: COG3293 Location: 4710015-4710387 bp Feature: domain Description: COG3293 Location: 471 001 5-471 0387 bp Feature: gene Location: 4711601-4712491 bp Ori: ABP56570.1 Feature: domain Description: rve Location: 4712132-4712453 bp Feature: domain Description: rve Location: 471 21 32-471 2453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), COG3464 (Transposase ), RVT-GII, GIIM (pfam08388), COG3293 (Transposase ), rve (pfam00665)