myRT

myRT report for GCA_000016505.1_ASM1650v1

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Seq: CP000673.1 Clostridium kluyveri DSM 555, complete genome (3964618 bp)
Overview 1 RT 1: 30542-36546 bp 2 RT 2: 558707-563967 bp 3 RT 3: 3030417-3034289 bp 4 RT 4: 3953848-3960475 bp Neighborhood of RT #1 [30542, 36546] Lactamase_B OrfB_Zn_ribbon RVT-GII GIIM PRK13169 Neighborhood of RT #2 [558707, 564011] Glyoxalase_2 RVT-GII HNHc STE14 BaeS PG_binding_1 PG_binding_1 Neighborhood of RT #3 [3030417, 3034300] ABC_trans_CmpB RVT-GII GIIM Ferritin_like_AB Neighborhood of RT #4 [3953848, 3960486] nucleoid_noc BcsQ RVT-GII Intron_maturas2 RsmG PRK05192 Feature: gene Location: 30542-31405 bp Ori: EDK32110.1 Feature: domain Description: Lactamase_B Location: 30590-31172 bp Feature: domain Description: Lactamase_B Location: 30590-31 1 72 bp Feature: gene Location: 31565-31735 bp Ori: EDK32111.1 Feature: domain Description: OrfB_Zn_ribbon Location: 31574-31652 bp Feature: domain Description: OrfB_Zn_ribbon Location: 31 574-31 652 bp Feature: gene Location: 32455-33747 bp Ori: EDK32112.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32752-33385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32752-33385 bp Feature: domain Description: GIIM Note: maturase Location: 33466-33691 bp Feature: domain Description: GIIM Note: maturase Location: 33466-33691 bp Feature: gene Location: 33889-34359 bp Ori: EDK32113.1 Feature: domain Description: PRK13169 Location: 34015-34207 bp Feature: domain Description: PRK1 31 69 Location: 3401 5-34207 bp Feature: gene Location: 35287-36546 bp Feature: gene Location: 558707-559168 bp Ori: EDK32635.1 Feature: domain Description: Glyoxalase_2 Location: 558716-559070 bp Feature: domain Description: Glyoxalase_2 Location: 55871 6-559070 bp Feature: gene Location: 559237-559428 bp Feature: gene Location: 560240-562060 bp Ori: EDK32637.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 560561-561260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 560561 -561 260 bp Feature: domain Description: HNHc Note: nucleases Location: 561785-561950 bp Feature: domain Description: HNHc Note: nucleases Location: 561 785-561 950 bp Feature: gene Location: 562285-562848 bp Ori: EDK32638.1 Feature: domain Description: STE14 Location: 562312-562846 bp Feature: domain Description: STE1 4 Location: 56231 2-562846 bp Feature: gene Location: 563673-564011 bp Ori: EDK32639.1 Feature: domain Description: BaeS Location: 563697-563769 bp Feature: domain Description: BaeS Location: 563697-563769 bp Feature: domain Description: PG_binding_1 Location: 563799-563901 bp Feature: domain Description: PG_binding_1 Location: 563799-563901 bp Feature: domain Description: PG_binding_1 Location: 563925-563967 bp Feature: domain Description: PG_binding_1 Location: 563925-563967 bp Feature: gene Location: 3030417-3030662 bp Feature: gene Location: 3030982-3031431 bp Ori: EDK34988.1 Feature: domain Description: ABC_trans_CmpB Location: 3031060-3031345 bp Feature: domain Description: ABC_trans_CmpB Location: 3031 060-3031 345 bp Feature: gene Location: 3031708-3033000 bp Ori: EDK34989.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3032005-3032638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3032005-3032638 bp Feature: domain Description: GIIM Note: maturase Location: 3032719-3032944 bp Feature: domain Description: GIIM Note: maturase Location: 303271 9-3032944 bp Feature: gene Location: 3033086-3033292 bp Feature: gene Location: 3033740-3034300 bp Ori: EDK34991.1 Feature: domain Description: Ferritin_like_AB Location: 3033944-3034289 bp Feature: domain Description: Ferritin_like_AB Location: 3033944-3034289 bp Feature: gene Location: 3953848-3954708 bp Ori: EDK35892.1 Gene: parB Feature: domain Description: nucleoid_noc Location: 3953938-3954658 bp Feature: domain Description: nucleoid_noc Location: 3953938-3954658 bp Feature: gene Location: 3954716-3955402 bp Ori: EDK35893.1 Gene: parA Feature: domain Description: BcsQ Location: 3954719-3955391 bp Feature: domain Description: BcsQ Location: 395471 9-3955391 bp Feature: gene Location: 3955596-3956984 bp Ori: EDK35894.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3955881-3956478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3955881 -3956478 bp Feature: domain Description: Intron_maturas2 Location: 3956592-3956865 bp Feature: domain Description: Intron_maturas2 Location: 3956592-3956865 bp Feature: gene Location: 3957862-3958575 bp Ori: EDK35895.1 Gene: gidB Feature: domain Description: RsmG Location: 3957883-3958510 bp Feature: domain Description: RsmG Location: 3957883-395851 0 bp Feature: gene Location: 3958600-3960486 bp Ori: EDK35896.1 Gene: gidA Feature: domain Description: PRK05192 Location: 3958615-3960475 bp Feature: domain Description: PRK051 92 Location: 395861 5-3960475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lactamase_B (smart00849), OrfB_Zn_ribbon (pfam07282), RVT-GII, GIIM (pfam08388), PRK13169 (DNA replication initiation control protein YabA), Glyoxalase_2 (pfam12681), HNHc (smart00507), STE14 (COG2020), BaeS (COG0642), PG_binding_1 (pfam01471)
ABC_trans_CmpB (pfam06541), Ferritin_like_AB (cd01045), nucleoid_noc (TIGR04285), BcsQ (COG1192), Intron_maturas2 (pfam01348), RsmG (COG0357), PRK05192 (tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG)