myRT

myRT report for GCA_000016645.1_ASM1664v1

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Seq: CP000685.1 Flavobacterium johnsoniae UW101, complete genome (6096872 bp)
Overview 1 RT 1: 2798581-2807074 bp 2 RT 2: 4414762-4423451 bp Neighborhood of RT #1 [2798581, 2807286] YcbB PRK09426 ArgK MM_CoA_mutase_1 RVT-UG2 HTH_XRE Neighborhood of RT #2 [4414762, 4424170] RVT-GII GIIM RHS_repeat RHS_repeat Rhs_assc_core Feature: gene Location: 2798581-2800140 bp Ori: ABQ05358.1 Feature: domain Description: YcbB Location: 2798725-2800114 bp Feature: domain Description: YcbB Location: 2798725-28001 1 4 bp Feature: gene Location: 2800429-2803869 bp Ori: ABQ05359.1 Feature: domain Description: PRK09426 Location: 2800465-2800807 bp Feature: domain Description: PRK09426 Location: 2800465-2800807 bp Feature: domain Description: ArgK Location: 2800891-2801710 bp Feature: domain Description: ArgK Location: 2800891 -2801 71 0 bp Feature: domain Description: MM_CoA_mutase_1 Location: 2801995-2803630 bp Feature: domain Description: MM_CoA_mutase_1 Location: 2801 995-2803630 bp Feature: gene Location: 2804401-2805918 bp Ori: ABQ05360.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2804635-2805547 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2804635-2805547 bp Feature: gene Location: 2806359-2806676 bp Feature: gene Location: 2806879-2807286 bp Ori: ABQ05362.1 Feature: domain Description: HTH_XRE Location: 2806912-2807074 bp Feature: domain Description: HTH_XRE Location: 280691 2-2807074 bp Feature: gene Location: 4414762-4415208 bp Feature: gene Location: 4415336-4416106 bp Feature: gene Location: 4416321-4417718 bp Ori: ABQ06741.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4416651-4417269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441 6651 -441 7269 bp Feature: domain Description: GIIM Note: maturase Location: 4417329-4417554 bp Feature: domain Description: GIIM Note: maturase Location: 441 7329-441 7554 bp Feature: gene Location: 4418184-4418906 bp Feature: gene Location: 4418909-4424170 bp Ori: ABQ06743.1 Feature: domain Description: RHS_repeat Location: 4422269-4422377 bp Feature: domain Description: RHS_repeat Location: 4422269-4422377 bp Feature: domain Description: RHS_repeat Location: 4422530-4422584 bp Feature: domain Description: RHS_repeat Location: 4422530-4422584 bp Feature: domain Description: Rhs_assc_core Location: 4423205-4423451 bp Feature: domain Description: Rhs_assc_core Location: 4423205-4423451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YcbB (pfam08664), PRK09426 (methylmalonyl-CoA mutase; Reviewed), ArgK (pfam03308), MM_CoA_mutase_1 (cd03678), RVT-UG2, HTH_XRE (smart00530), RVT-GII, GIIM (pfam08388), RHS_repeat (pfam05593), Rhs_assc_core (TIGR03696)