myRT

myRT report for GCA_000016765.1_ASM1676v1

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Seq: CP000699.1 Sphingomonas wittichii RW1, complete genome (5382261 bp)
Overview 1 RT 1: 1191266-1197754 bp Neighborhood of RT #1 [1191266, 1197825] HcaE LysR RVT-UG12 protocat_pcaD decarb_PcaC pCLME Feature: gene Location: 1191266-1192345 bp Ori: ABQ67433.1 Feature: domain Description: HcaE Location: 1191272-1192337 bp Feature: domain Description: HcaE Location: 1 1 91 272-1 1 92337 bp Feature: gene Location: 1192469-1193410 bp Ori: ABQ67434.1 Feature: domain Description: LysR Location: 1192490-1193342 bp Feature: domain Description: LysR Location: 1 1 92490-1 1 93342 bp Feature: gene Location: 1193709-1194704 bp Ori: ABQ67435.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1194051-1194507 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 1 94051 -1 1 94507 bp Feature: gene Location: 1195483-1196676 bp Ori: ABQ67436.1 Feature: domain Description: protocat_pcaD Location: 1195513-1196254 bp Feature: domain Description: protocat_pcaD Location: 1 1 9551 3-1 1 96254 bp Feature: domain Description: decarb_PcaC Location: 1196290-1196650 bp Feature: domain Description: decarb_PcaC Location: 1 1 96290-1 1 96650 bp Feature: gene Location: 1196680-1197825 bp Ori: ABQ67437.1 Feature: domain Description: pCLME Location: 1196713-1197754 bp Feature: domain Description: pCLME Location: 1 1 9671 3-1 1 97754 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HcaE (COG4638), LysR (COG0583), RVT-UG12, protocat_pcaD (TIGR02427), decarb_PcaC (TIGR02425), pCLME (cd01597)

Seq: CP000701.1 Sphingomonas wittichii RW1 plasmid pSWIT02, complete sequence (222757 bp)
Overview 1 RT 1: 77487-82011 bp Neighborhood of RT #1 [77487, 82016] RVT-GII Intron_maturas2 HNHc DUF3768 Feature: gene Location: 77487-77651 bp Feature: gene Location: 77897-78238 bp Feature: gene Location: 78457-80175 bp Ori: ABQ71588.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78577-79408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78577-79408 bp Feature: domain Description: Intron_maturas2 Location: 79549-79807 bp Feature: domain Description: Intron_maturas2 Location: 79549-79807 bp Feature: domain Description: HNHc Note: nucleases Location: 79975-80122 bp Feature: domain Description: HNHc Note: nucleases Location: 79975-8012 2 bp Feature: gene Location: 80872-81597 bp Feature: gene Location: 81621-82016 bp Ori: ABQ71590.1 Feature: domain Description: DUF3768 Location: 81741-82011 bp Feature: domain Description: DUF3768 Location: 81741-82 011 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF3768 (pfam12599)