myRT

myRT report for GCA_000017405.1_ASM1740v1

Download annotations/find similar RTs

Seq: CP000760.1 Ochrobactrum anthropi ATCC 49188 plasmid pOANT01, complete sequence (170351 bp)
Overview 1 RT 1: 33305-40249 bp 2 RT 2: 77279-82063 bp 3 RT 3: 159186-164923 bp Neighborhood of RT #1 [33305, 40284] GabT COG3547 RVT-GII GIIM HTH_21 InsE Neighborhood of RT #2 [77279, 82086] DUF736 VbhA RVT-GII GIIM FIDO ArdC Neighborhood of RT #3 [159186, 164997] InsE HTH_32 RVT-GII KOG4768 COG3547 excise Feature: gene Location: 33305-34615 bp Ori: ABS17189.1 Feature: domain Description: GabT Location: 33314-34562 bp Feature: domain Description: GabT Location: 3331 4-34562 bp Feature: gene Location: 35677-36714 bp Ori: ABS17190.1 Feature: domain Description: COG3547 Location: 35701-36661 bp Feature: domain Description: COG3547 Location: 35701 -36661 bp Feature: gene Location: 37428-38942 bp Ori: ABS17191.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37686-38421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37686-38421 bp Feature: domain Description: GIIM Note: maturase Location: 38493-38721 bp Feature: domain Description: GIIM Note: maturase Location: 38493-38721 bp Feature: gene Location: 39575-39976 bp Ori: ABS17192.1 Feature: domain Description: HTH_21 Location: 39680-39839 bp Feature: domain Description: HTH_21 Location: 39680-39839 bp Feature: gene Location: 39973-40284 bp Ori: ABS17193.1 Feature: domain Description: InsE Location: 39976-40249 bp Feature: domain Description: InsE Location: 39976-40249 bp Feature: gene Location: 77279-77620 bp Ori: ABS17228.1 Feature: domain Description: DUF736 Location: 77342-77510 bp Feature: domain Description: DUF736 Location: 77342-7751 0 bp Feature: gene Location: 77741-77941 bp Ori: ABS17229.1 Feature: domain Description: VbhA Location: 77795-77933 bp Feature: domain Description: VbhA Location: 77795-77933 bp Feature: gene Location: 78457-79860 bp Ori: ABS17230.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78796-79414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78796-7941 4 bp Feature: domain Description: GIIM Note: maturase Location: 79462-79687 bp Feature: domain Description: GIIM Note: maturase Location: 79462-79687 bp Feature: gene Location: 79936-80985 bp Ori: ABS17231.1 Feature: domain Description: FIDO Location: 79945-80605 bp Feature: domain Description: FIDO Location: 79945-80605 bp Feature: gene Location: 81199-82086 bp Ori: ABS17232.1 Feature: domain Description: ArdC Location: 81214-82063 bp Feature: domain Description: ArdC Location: 81 21 4-82063 bp Feature: gene Location: 159186-159560 bp Ori: ABS17307.1 Feature: domain Description: InsE Location: 159249-159525 bp Feature: domain Description: InsE Location: 1 59249-1 59525 bp Feature: gene Location: 159557-160027 bp Ori: ABS17308.1 Feature: domain Description: HTH_32 Location: 159662-159884 bp Feature: domain Description: HTH_32 Location: 1 59662-1 59884 bp Feature: gene Location: 160660-162171 bp Ori: ABS17309.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160918-161650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6091 8-1 61 650 bp Feature: domain Description: KOG4768 Location: 161809-161926 bp Feature: domain Description: KOG4768 Location: 1 61 809-1 61 926 bp Feature: gene Location: 162686-163948 bp Ori: ABS17310.1 Feature: domain Description: COG3547 Location: 162731-163874 bp Feature: domain Description: COG3547 Location: 1 62731 -1 63874 bp Feature: gene Location: 164668-164997 bp Ori: ABS17311.1 Feature: domain Description: excise Location: 164785-164923 bp Feature: domain Description: excise Location: 1 64785-1 64923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GabT (COG0160), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), HTH_21 (pfam13276), InsE (COG2963), DUF736 (pfam05284), VbhA (pfam18495), FIDO (COG2184), ArdC (COG4227)
HTH_32 (pfam13565), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), excise (TIGR01764)

Seq: CP000758.1 Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence (2887297 bp)
Overview 1 RT 1: 1214316-1220216 bp 2 RT 2: 1379008-1385280 bp 3 RT 3: 1749077-1755679 bp 4 RT 4: 1788926-1794029 bp 5 RT 5: 2467758-2476812 bp Neighborhood of RT #1 [1214316, 1220216] RVT-UG12 Neighborhood of RT #2 [1379008, 1385321] RVT-UG3 RVT-UG8 SR_Res_par HTH_7 COG3448 Neighborhood of RT #3 [1749077, 1755693] MalK MPP_GpdQ RVT-GII GIIM PRK05764 TetR_N TetR_C_22 Neighborhood of RT #4 [1788926, 1794061] COG2899 RVT-GII GIIM DUF2165 nicotinamidase Neighborhood of RT #5 [2467758, 2476817] ScpA BglX RVT-GII GIIM SPOR argS Feature: gene Location: 1214316-1214777 bp Feature: gene Location: 1215401-1216276 bp Feature: gene Location: 1216524-1218197 bp Ori: ABS13872.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1216902-1217340 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 12 16902 -12 17340 bp Feature: gene Location: 1218851-1219717 bp Feature: gene Location: 1219848-1220216 bp Feature: gene Location: 1379008-1379724 bp Feature: gene Location: 1379736-1380065 bp Feature: gene Location: 1380181-1381455 bp Ori: ABS14021.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1380487-1380973 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1380487-1380973 bp Feature: gene Location: 1381448-1383469 bp Ori: ABS14022.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1381979-1382423 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1381979-1382 42 3 bp Feature: gene Location: 1383811-1384428 bp Ori: ABS14023.1 Feature: domain Description: SR_Res_par Location: 1383823-1384255 bp Feature: domain Description: SR_Res_par Location: 138382 3-13842 55 bp Feature: domain Description: HTH_7 Location: 1384291-1384396 bp Feature: domain Description: HTH_7 Location: 13842 91-1384396 bp Feature: gene Location: 1384479-1385321 bp Ori: ABS14024.1 Feature: domain Description: COG3448 Location: 1385073-1385280 bp Feature: domain Description: COG3448 Location: 1385073-13852 80 bp Feature: gene Location: 1749077-1750255 bp Ori: ABS14385.1 Feature: domain Description: MalK Location: 1749083-1750178 bp Feature: domain Description: MalK Location: 1749083-1750178 bp Feature: gene Location: 1750252-1751097 bp Ori: ABS14386.1 Feature: domain Description: MPP_GpdQ Location: 1750261-1750912 bp Feature: domain Description: MPP_GpdQ Location: 17502 61-1750912 bp Feature: gene Location: 1752063-1753466 bp Ori: ABS14387.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1752402-1753020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1752 402 -175302 0 bp Feature: domain Description: GIIM Note: maturase Location: 1753068-1753293 bp Feature: domain Description: GIIM Note: maturase Location: 1753068-17532 93 bp Feature: gene Location: 1753620-1754822 bp Ori: ABS14388.1 Feature: domain Description: PRK05764 Location: 1753629-1754814 bp Feature: domain Description: PRK05764 Location: 175362 9-1754814 bp Feature: gene Location: 1755043-1755693 bp Ori: ABS14389.1 Feature: domain Description: TetR_N Location: 1755151-1755274 bp Feature: domain Description: TetR_N Location: 1755151-17552 74 bp Feature: domain Description: TetR_C_22 Location: 1755364-1755679 bp Feature: domain Description: TetR_C_2 2 Location: 1755364-1755679 bp Feature: gene Location: 1788926-1789195 bp Feature: gene Location: 1789607-1790674 bp Ori: ABS14422.1 Feature: domain Description: COG2899 Location: 1789610-1790633 bp Feature: domain Description: COG2 899 Location: 1789610-1790633 bp Feature: gene Location: 1791183-1792586 bp Ori: ABS14423.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1791522-1792140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 179152 2 -1792 140 bp Feature: domain Description: GIIM Note: maturase Location: 1792188-1792413 bp Feature: domain Description: GIIM Note: maturase Location: 1792 188-1792 413 bp Feature: gene Location: 1792780-1793280 bp Ori: ABS14424.1 Feature: domain Description: DUF2165 Location: 1792795-1793257 bp Feature: domain Description: DUF2 165 Location: 1792 795-17932 57 bp Feature: gene Location: 1793432-1794061 bp Ori: ABS14425.1 Feature: domain Description: nicotinamidase Location: 1793444-1794029 bp Feature: domain Description: nicotinamidase Location: 1793444-179402 9 bp Feature: gene Location: 2467758-2468609 bp Ori: ABS15061.1 Feature: domain Description: ScpA Location: 2467857-2468577 bp Feature: domain Description: ScpA Location: 2 467857-2 468577 bp Feature: gene Location: 2468683-2469702 bp Ori: ABS15062.1 Feature: domain Description: BglX Location: 2468689-2469586 bp Feature: domain Description: BglX Location: 2 468689-2 469586 bp Feature: gene Location: 2469856-2471259 bp Ori: ABS15063.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2470195-2470813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 470195-2 470813 bp Feature: domain Description: GIIM Note: maturase Location: 2470861-2471086 bp Feature: domain Description: GIIM Note: maturase Location: 2 470861-2 471086 bp Feature: gene Location: 2471767-2474748 bp Ori: ABS15064.1 Feature: domain Description: SPOR Location: 2474506-2474743 bp Feature: domain Description: SPOR Location: 2 474506-2 474743 bp Feature: gene Location: 2475060-2476817 bp Ori: ABS15065.1 Feature: domain Description: argS Location: 2475075-2476812 bp Feature: domain Description: argS Location: 2 475075-2 476812 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12, RVT-UG3, RVT-UG8, SR_Res_par (cd03767), HTH_7 (pfam02796), COG3448 (CBS-domain-containing membrane protein ), MalK (COG3839), MPP_GpdQ (cd07402), RVT-GII, GIIM (pfam08388)
PRK05764 (aspartate aminotransferase; Provisional), TetR_N (pfam00440), TetR_C_22 (pfam17928), COG2899 (Uncharacterized protein ), DUF2165 (pfam09933), nicotinamidase (cd01011), ScpA (COG1354), BglX (COG1472), SPOR (pfam05036), argS (TIGR00456)

Seq: CP000759.1 Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence (1895911 bp)
Overview 1 RT 1: 621228-626021 bp Neighborhood of RT #1 [621228, 626026] MarR organ_hyd_perox RVT-GII GIIM DapA RhtB Feature: gene Location: 621228-621686 bp Ori: ABS15997.1 Feature: domain Description: MarR Location: 621303-621621 bp Feature: domain Description: MarR Location: 6213 03 -621621 bp Feature: gene Location: 621831-622253 bp Ori: ABS15998.1 Feature: domain Description: organ_hyd_perox Location: 621843-622248 bp Feature: domain Description: organ_hyd_perox Location: 621843 -622248 bp Feature: gene Location: 622755-624158 bp Ori: ABS15999.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 623094-623712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 623 094-623 712 bp Feature: domain Description: GIIM Note: maturase Location: 623760-623985 bp Feature: domain Description: GIIM Note: maturase Location: 623 760-623 985 bp Feature: gene Location: 624465-625364 bp Ori: ABS16000.1 Feature: domain Description: DapA Location: 624471-625350 bp Feature: domain Description: DapA Location: 624471-6253 50 bp Feature: gene Location: 625385-626026 bp Ori: ABS16001.1 Feature: domain Description: RhtB Location: 625409-626021 bp Feature: domain Description: RhtB Location: 625409-626021 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MarR (pfam01047), organ_hyd_perox (TIGR03561), RVT-GII, GIIM (pfam08388), DapA (COG0329), RhtB (COG1280)