myRT

myRT report for GCA_000017705.1_ASM1770v1

Download annotations/find similar RTs

Seq: CP000791.1 Vibrio campbellii ATCC BAA-1116 plasmid pVIBHAR, complete sequence (89008 bp)
Overview 1 RT 1: 68756-72075 bp 2 RT 2: 84255-87145 bp Neighborhood of RT #1 [68756, 72075] FimT RVT_N RVT-GII GIIM Neighborhood of RT #2 [84255, 87159] YecT RVT_N RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 68756-69334 bp Ori: ABU75103.1 Feature: domain Description: FimT Location: 68804-68990 bp Feature: domain Description: FimT Location: 68804-68990 bp Feature: gene Location: 69415-69612 bp Feature: gene Location: 69528-71042 bp Ori: ABU75105.1 Feature: domain Description: RVT_N Location: 69618-69861 bp Feature: domain Description: RVT_N Location: 6961 8-69861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69906-70533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69906-70533 bp Feature: domain Description: GIIM Note: maturase Location: 70593-70818 bp Feature: domain Description: GIIM Note: maturase Location: 70593-7081 8 bp Feature: gene Location: 71715-71831 bp Feature: gene Location: 71833-72075 bp Feature: gene Location: 84255-84644 bp Ori: ABU75119.1 Feature: domain Description: YecT Location: 84297-84636 bp Feature: domain Description: YecT Location: 84297-84636 bp Feature: gene Location: 85163-85330 bp Feature: gene Location: 85311-86780 bp Ori: ABU75121.1 Feature: domain Description: RVT_N Location: 85356-85599 bp Feature: domain Description: RVT_N Location: 85356-85599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85644-86271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85644-86271 bp Feature: domain Description: GIIM Note: maturase Location: 86334-86556 bp Feature: domain Description: GIIM Note: maturase Location: 86334-86556 bp Feature: gene Location: 86696-86893 bp Feature: gene Location: 87025-87159 bp Ori: ABU75123.1 Feature: domain Description: DDE_Tnp_IS66_C Location: 87037-87145 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 87037-871 45 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimT (COG4970), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), YecT (COG3755), DDE_Tnp_IS66_C (pfam13817)

Seq: CP000789.1 Vibrio campbellii ATCC BAA-1116 chromosome I, complete sequence (3765351 bp)
Overview 1 RT 1: 136720-142253 bp 2 RT 2: 261346-267085 bp 3 RT 3: 324618-329412 bp 4 RT 4: 333274-341266 bp 5 RT 5: 736454-741174 bp 6 RT 6: 1091095-1105732 bp 7 RT 7: 1298820-1306026 bp 8 RT 8: 1311165-1315940 bp 9 RT 9: 1649300-1654752 bp 10 RT 10: 1824011-1828870 bp 11 RT 11: 1855255-1862051 bp 12 RT 12: 2002950-2006764 bp 13 RT 13: 2246463-2250045 bp 14 RT 14: 2436053-2442864 bp 15 RT 15: 2504673-2510672 bp 16 RT 16: 2600004-2607095 bp 17 RT 17: 2668301-2675221 bp 18 RT 18: 2997495-3001976 bp 19 RT 19: 3008263-3013792 bp 20 RT 20: 3032751-3040154 bp 21 RT 21: 3049773-3056722 bp 22 RT 22: 3143129-3152127 bp 23 RT 23: 3290053-3295081 bp 24 RT 24: 3528237-3533081 bp 25 RT 25: 3680157-3685201 bp 26 RT 26: 3695918-3701659 bp Neighborhood of RT #1 [136720, 142255] SapB RVT-GII GIIM groEL groES Neighborhood of RT #2 [261346, 267090] plsB GIIM RVT-GII ubiA Chor_lyase Neighborhood of RT #3 [324618, 329423] PRK11031 GIIM RVT-GII PRK11212 DUF3630 Neighborhood of RT #4 [333274, 341280] RhtB Ggt RVT-GII GIIM uvrD DUF2282 Neighborhood of RT #5 [736454, 741182] PRK11570 OapA RVT-GII GIIM RhaT ElaA Neighborhood of RT #6 [1091095, 1105761] chitinase_GH19 COG3979 ChtBD3 PRK10659 RVT-GII GIIM AlsT PRK11139 MS_channel HTH_29 HTH_33 DDE_3 RVT_N RVT-GII GIIM PHA02517 Neighborhood of RT #7 [1298820, 1306028] flgI flagell_FlgJ RVT-GII GIIM flgK flgL Neighborhood of RT #8 [1311165, 1315945] HTH_23 HTH_33 DDE_3 RVT-GII GIIM PRK09439 PRK11177 Neighborhood of RT #9 [1649300, 1655033] Big_1 Big_1 RVT-CRISPR-like DDE_Tnp_1 Neighborhood of RT #10 [1824011, 1828878] BioC PRK12374 RVT-GII GIIM PRK05457 Neighborhood of RT #11 [1855255, 1862101] cysS PRK04296 RVT-GII DDE_Tnp_1 RVT-GII GIIM YdcF-like SDR_a4 Neighborhood of RT #12 [2002950, 2006772] DDE_Tnp_1 RVT_N RVT-GII GIIM YecT Neighborhood of RT #13 [2246463, 2250045] Nudix_Hydrolase_6 RVT_N RVT-GII GIIM Neighborhood of RT #14 [2436053, 2442872] LysR_substrate COG5361 RVT-GII GIIM gnd NagB Neighborhood of RT #15 [2504673, 2510932] Acetyltransf_1 RVT-GII GIIM metA Nterm_IS4 DDE_Tnp_1 Neighborhood of RT #16 [2600004, 2607095] HTH_ARSR RVT_N RVT-GII GIIM MopB_Tetrathionate-Ra PRK15488 Neighborhood of RT #17 [2668301, 2675226] MATE_like_8 SDR_a2 DUF2867 RVT-GII GIIM DUF2913 PRK11102 Neighborhood of RT #18 [2997495, 3002161] DDE_Tnp_1 Nterm_IS4 DDE_Tnp_1 RVT-GII GIIM xerS Neighborhood of RT #19 [3008263, 3013794] Tar RVT_N RVT-GII GIIM glyox_I DUF2753 Neighborhood of RT #20 [3032751, 3040159] Ribosomal_S4Pg PRK08862 RVT-GII GIIM PRK13805 PRK11111 Neighborhood of RT #21 [3049773, 3056730] PRK13689 YejM RVT-GII GIIM Nterm_IS4 DDE_Tnp_1 M48C_Oma1_like Neighborhood of RT #22 [3143129, 3152129] SixA Ptr RVT-GII GIIM fadJ FadI Neighborhood of RT #23 [3290053, 3295098] PleD PleD RVT-GII GIIM Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 COG2991 Neighborhood of RT #24 [3528237, 3533122] PRK00418 COG3547 RVT-GII group_II_RT_mat rplS trmD Neighborhood of RT #25 [3680157, 3685209] PRK00893 PRK11401 RVT-GII group_II_RT_mat PRK15018 MurA Neighborhood of RT #26 [3695918, 3701667] PRK10897 MgtE RVT-GII GIIM PRK11040 YjgA Feature: gene Location: 136720-137217 bp Ori: ABU69187.1 Feature: domain Description: SapB Location: 136774-137200 bp Feature: domain Description: SapB Location: 136774-1372 00 bp Feature: gene Location: 137314-137889 bp Feature: gene Location: 138227-139519 bp Ori: ABU69189.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138425-139037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13842 5-139037 bp Feature: domain Description: GIIM Note: maturase Location: 139091-139295 bp Feature: domain Description: GIIM Note: maturase Location: 139091-1392 95 bp Feature: gene Location: 140244-141890 bp Ori: ABU69190.1 Feature: domain Description: groEL Location: 140250-141867 bp Feature: domain Description: groEL Location: 1402 50-141867 bp Feature: gene Location: 141965-142255 bp Ori: ABU69191.1 Feature: domain Description: groES Location: 141968-142253 bp Feature: domain Description: groES Location: 141968-142 2 53 bp Feature: gene Location: 261346-263718 bp Ori: ABU69297.1 Feature: domain Description: plsB Location: 261349-263689 bp Feature: domain Description: plsB Location: 2 61349-2 63689 bp Feature: gene Location: 263781-264209 bp Ori: ABU69298.1 Feature: domain Description: GIIM Note: maturase Location: 263784-263985 bp Feature: domain Description: GIIM Note: maturase Location: 2 63784-2 63985 bp Feature: gene Location: 264228-265073 bp Ori: ABU69299.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264426-265038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6442 6-2 65038 bp Feature: gene Location: 265696-266550 bp Ori: ABU69300.1 Feature: domain Description: ubiA Location: 265708-266542 bp Feature: domain Description: ubiA Location: 2 65708-2 66542 bp Feature: gene Location: 266551-267090 bp Ori: ABU69301.1 Feature: domain Description: Chor_lyase Location: 266593-267085 bp Feature: domain Description: Chor_lyase Location: 2 66593-2 67085 bp Feature: gene Location: 324618-326111 bp Ori: ABU69361.1 Feature: domain Description: PRK11031 Location: 324633-326103 bp Feature: domain Description: PRK11031 Location: 32 4633-32 6103 bp Feature: gene Location: 326301-326729 bp Ori: ABU69362.1 Feature: domain Description: GIIM Note: maturase Location: 326304-326505 bp Feature: domain Description: GIIM Note: maturase Location: 32 6304-32 6505 bp Feature: gene Location: 326726-327595 bp Ori: ABU69363.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 326924-327533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 692 4-32 7533 bp Feature: gene Location: 328209-328883 bp Ori: ABU69364.1 Feature: domain Description: PRK11212 Location: 328212-328839 bp Feature: domain Description: PRK112 12 Location: 32 82 12 -32 8839 bp Feature: gene Location: 329118-329423 bp Ori: ABU69365.1 Feature: domain Description: DUF3630 Location: 329133-329412 bp Feature: domain Description: DUF3630 Location: 32 9133-32 9412 bp Feature: gene Location: 333274-333978 bp Ori: ABU69369.1 Feature: domain Description: RhtB Location: 333334-333955 bp Feature: domain Description: RhtB Location: 333334-333955 bp Feature: gene Location: 334090-335856 bp Ori: ABU69370.1 Feature: domain Description: Ggt Location: 334186-335851 bp Feature: domain Description: Ggt Location: 334186-335851 bp Feature: gene Location: 336658-337950 bp Ori: ABU69371.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336856-337468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336856-337468 bp Feature: domain Description: GIIM Note: maturase Location: 337522-337726 bp Feature: domain Description: GIIM Note: maturase Location: 33752 2 -33772 6 bp Feature: gene Location: 338567-340741 bp Ori: ABU69372.1 Feature: domain Description: uvrD Location: 338588-340733 bp Feature: domain Description: uvrD Location: 338588-340733 bp Feature: gene Location: 341020-341280 bp Ori: ABU69373.1 Feature: domain Description: DUF2282 Location: 341119-341266 bp Feature: domain Description: DUF2 2 82 Location: 341119-3412 66 bp Feature: gene Location: 736454-737074 bp Ori: ABU69758.1 Feature: domain Description: PRK11570 Location: 736457-737072 bp Feature: domain Description: PRK11570 Location: 736457-737072 bp Feature: gene Location: 737150-737902 bp Ori: ABU69759.1 Feature: domain Description: OapA Location: 737309-737900 bp Feature: domain Description: OapA Location: 737309-737900 bp Feature: gene Location: 738515-739807 bp Ori: ABU69760.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738713-739325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738713-73932 5 bp Feature: domain Description: GIIM Note: maturase Location: 739379-739583 bp Feature: domain Description: GIIM Note: maturase Location: 739379-739583 bp Feature: gene Location: 739875-740729 bp Ori: ABU69761.1 Feature: domain Description: RhaT Location: 739887-740703 bp Feature: domain Description: RhaT Location: 739887-740703 bp Feature: gene Location: 740730-741182 bp Ori: ABU69762.1 Feature: domain Description: ElaA Location: 740733-741174 bp Feature: domain Description: ElaA Location: 740733-741174 bp Feature: gene Location: 1091095-1092795 bp Ori: ABU70074.1 Feature: domain Description: chitinase_GH19 Location: 1091371-1092112 bp Feature: domain Description: chitinase_GH19 Location: 1091371-1092 112 bp Feature: domain Description: COG3979 Location: 1092391-1092595 bp Feature: domain Description: COG3979 Location: 1092 391-1092 595 bp Feature: domain Description: ChtBD3 Location: 1092655-1092775 bp Feature: domain Description: ChtBD3 Location: 1092 655-1092 775 bp Feature: gene Location: 1092978-1093571 bp Ori: ABU70075.1 Feature: domain Description: PRK10659 Location: 1092984-1093533 bp Feature: domain Description: PRK10659 Location: 1092 984-1093533 bp Feature: gene Location: 1094192-1095484 bp Ori: ABU70076.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1094390-1095002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1094390-1095002 bp Feature: domain Description: GIIM Note: maturase Location: 1095056-1095260 bp Feature: domain Description: GIIM Note: maturase Location: 1095056-10952 60 bp Feature: gene Location: 1095590-1097137 bp Ori: ABU70077.1 Feature: domain Description: AlsT Location: 1095593-1096997 bp Feature: domain Description: AlsT Location: 1095593-1096997 bp Feature: gene Location: 1098809-1099729 bp Ori: ABU70078.1 Feature: domain Description: PRK11139 Location: 1098833-1099706 bp Feature: domain Description: PRK11139 Location: 1098833-1099706 bp Feature: gene Location: 1100620-1101120 bp Ori: ABU70080.1 Feature: domain Description: MS_channel Location: 1100629-1101016 bp Feature: domain Description: MS_channel Location: 110062 9-1101016 bp Feature: gene Location: 1101166-1102194 bp Ori: ABU70081.1 Feature: domain Description: HTH_29 Location: 1101250-1101409 bp Feature: domain Description: HTH_2 9 Location: 11012 50-1101409 bp Feature: domain Description: HTH_33 Location: 1101448-1101616 bp Feature: domain Description: HTH_33 Location: 1101448-1101616 bp Feature: domain Description: DDE_3 Location: 1101655-1102081 bp Feature: domain Description: DDE_3 Location: 1101655-1102 081 bp Feature: gene Location: 1102479-1103993 bp Ori: ABU70082.1 Feature: domain Description: RVT_N Location: 1102569-1102812 bp Feature: domain Description: RVT_N Location: 1102 569-1102 812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1102857-1103484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1102 857-1103484 bp Feature: domain Description: GIIM Note: maturase Location: 1103544-1103769 bp Feature: domain Description: GIIM Note: maturase Location: 1103544-1103769 bp Feature: gene Location: 1104484-1104927 bp Feature: gene Location: 1105060-1105761 bp Ori: ABU70084.1 Feature: domain Description: PHA02517 Location: 1105096-1105732 bp Feature: domain Description: PHA02 517 Location: 1105096-1105732 bp Feature: gene Location: 1298820-1299911 bp Ori: ABU70271.1 Feature: domain Description: flgI Location: 1298832-1299909 bp Feature: domain Description: flgI Location: 12 98832 -12 99909 bp Feature: gene Location: 1299930-1300856 bp Ori: ABU70272.1 Feature: domain Description: flagell_FlgJ Location: 1299960-1300845 bp Feature: domain Description: flagell_FlgJ Location: 12 99960-1300845 bp Feature: gene Location: 1301486-1302778 bp Ori: ABU70273.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1301684-1302296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1301684-1302 2 96 bp Feature: domain Description: GIIM Note: maturase Location: 1302350-1302554 bp Feature: domain Description: GIIM Note: maturase Location: 1302 350-1302 554 bp Feature: gene Location: 1302912-1304825 bp Ori: ABU70274.1 Feature: domain Description: flgK Location: 1302915-1304823 bp Feature: domain Description: flgK Location: 1302 915-130482 3 bp Feature: gene Location: 1304838-1306028 bp Ori: ABU70275.1 Feature: domain Description: flgL Location: 1304847-1306026 bp Feature: domain Description: flgL Location: 1304847-130602 6 bp Feature: gene Location: 1311165-1311416 bp Feature: gene Location: 1311449-1312480 bp Ori: ABU70281.1 Feature: domain Description: HTH_23 Location: 1311521-1311638 bp Feature: domain Description: HTH_2 3 Location: 131152 1-1311638 bp Feature: domain Description: HTH_33 Location: 1311734-1311902 bp Feature: domain Description: HTH_33 Location: 1311734-1311902 bp Feature: domain Description: DDE_3 Location: 1311944-1312373 bp Feature: domain Description: DDE_3 Location: 1311944-1312 373 bp Feature: gene Location: 1312502-1313554 bp Ori: ABU70282.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1312508-1313072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1312 508-1313072 bp Feature: domain Description: GIIM Note: maturase Location: 1313126-1313330 bp Feature: domain Description: GIIM Note: maturase Location: 131312 6-1313330 bp Feature: gene Location: 1313606-1314115 bp Ori: ABU70283.1 Feature: domain Description: PRK09439 Location: 1313609-1314113 bp Feature: domain Description: PRK09439 Location: 1313609-1314113 bp Feature: gene Location: 1314221-1315945 bp Ori: ABU70284.1 Feature: domain Description: PRK11177 Location: 1314224-1315940 bp Feature: domain Description: PRK11177 Location: 13142 2 4-1315940 bp Feature: gene Location: 1649300-1650184 bp Feature: gene Location: 1650305-1652995 bp Ori: ABU70610.1 Feature: domain Description: Big_1 Location: 1651775-1651952 bp Feature: domain Description: Big_1 Location: 1651775-1651952 bp Feature: domain Description: Big_1 Location: 1652075-1652237 bp Feature: domain Description: Big_1 Location: 1652 075-1652 2 37 bp Feature: gene Location: 1653098-1653694 bp Ori: ABU70611.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1653296-1653668 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 16532 96-1653668 bp Feature: gene Location: 1653691-1653822 bp Feature: gene Location: 1653840-1655033 bp Ori: ABU70613.1 Feature: domain Description: DDE_Tnp_1 Location: 1654266-1654752 bp Feature: domain Description: DDE_Tnp_1 Location: 16542 66-1654752 bp Feature: gene Location: 1824011-1824817 bp Ori: ABU70778.1 Feature: domain Description: BioC Location: 1824077-1824815 bp Feature: domain Description: BioC Location: 182 4077-182 4815 bp Feature: gene Location: 1824814-1825497 bp Ori: ABU70779.1 Feature: domain Description: PRK12374 Location: 1824817-1825486 bp Feature: domain Description: PRK12 374 Location: 182 4817-182 5486 bp Feature: gene Location: 1826116-1827408 bp Ori: ABU70780.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1826314-1826926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182 6314-182 692 6 bp Feature: domain Description: GIIM Note: maturase Location: 1826980-1827184 bp Feature: domain Description: GIIM Note: maturase Location: 182 6980-182 7184 bp Feature: gene Location: 1827482-1827649 bp Feature: gene Location: 1828009-1828878 bp Ori: ABU70782.1 Feature: domain Description: PRK05457 Location: 1828012-1828870 bp Feature: domain Description: PRK05457 Location: 182 8012 -182 8870 bp Feature: gene Location: 1855255-1856637 bp Ori: ABU70810.1 Feature: domain Description: cysS Location: 1855258-1856635 bp Feature: domain Description: cysS Location: 18552 58-1856635 bp Feature: gene Location: 1856752-1857300 bp Ori: ABU70811.1 Feature: domain Description: PRK04296 Location: 1856755-1857289 bp Feature: domain Description: PRK042 96 Location: 1856755-18572 89 bp Feature: gene Location: 1857911-1858504 bp Ori: ABU70812.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1858109-1858484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1858109-1858484 bp Feature: gene Location: 1858600-1859793 bp Ori: ABU70813.1 Feature: domain Description: DDE_Tnp_1 Location: 1859026-1859512 bp Feature: domain Description: DDE_Tnp_1 Location: 185902 6-1859512 bp Feature: gene Location: 1859800-1860543 bp Ori: ABU70814.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1859815-1860061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1859815-1860061 bp Feature: domain Description: GIIM Note: maturase Location: 1860115-1860319 bp Feature: domain Description: GIIM Note: maturase Location: 1860115-1860319 bp Feature: gene Location: 1860606-1861244 bp Ori: ABU70815.1 Feature: domain Description: YdcF-like Location: 1860678-1861074 bp Feature: domain Description: YdcF-like Location: 1860678-1861074 bp Feature: gene Location: 1861241-1862101 bp Ori: ABU70816.1 Feature: domain Description: SDR_a4 Location: 1861289-1862051 bp Feature: domain Description: SDR_a4 Location: 18612 89-1862 051 bp Feature: gene Location: 2002950-2003450 bp Feature: gene Location: 2003437-2004144 bp Ori: ABU70976.1 Feature: domain Description: DDE_Tnp_1 Location: 2003452-2003863 bp Feature: domain Description: DDE_Tnp_1 Location: 2 003452 -2 003863 bp Feature: gene Location: 2004247-2005716 bp Ori: ABU70977.1 Feature: domain Description: RVT_N Location: 2004292-2004535 bp Feature: domain Description: RVT_N Location: 2 0042 92 -2 004535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2004580-2005207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 004580-2 0052 07 bp Feature: domain Description: GIIM Note: maturase Location: 2005267-2005492 bp Feature: domain Description: GIIM Note: maturase Location: 2 0052 67-2 005492 bp Feature: gene Location: 2005697-2005864 bp Feature: gene Location: 2006383-2006772 bp Ori: ABU70979.1 Feature: domain Description: YecT Location: 2006428-2006764 bp Feature: domain Description: YecT Location: 2 00642 8-2 006764 bp Feature: gene Location: 2246463-2246909 bp Ori: ABU71209.1 Feature: domain Description: Nudix_Hydrolase_6 Location: 2246475-2246835 bp Feature: domain Description: Nudix_Hydrolase_6 Location: 2 2 46475-2 2 46835 bp Feature: gene Location: 2247342-2247527 bp Feature: gene Location: 2247536-2248912 bp Ori: ABU71211.1 Feature: domain Description: RVT_N Location: 2247539-2247731 bp Feature: domain Description: RVT_N Location: 2 2 47539-2 2 47731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2247776-2248403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 47776-2 2 48403 bp Feature: domain Description: GIIM Note: maturase Location: 2248463-2248688 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 48463-2 2 48688 bp Feature: gene Location: 2249030-2249500 bp Feature: gene Location: 2249590-2250045 bp Feature: gene Location: 2436053-2436592 bp Ori: ABU71386.1 Feature: domain Description: LysR_substrate Location: 2436113-2436575 bp Feature: domain Description: LysR_substrate Location: 2 436113-2 436575 bp Feature: gene Location: 2436691-2438247 bp Ori: ABU71387.1 Feature: domain Description: COG5361 Location: 2436826-2438245 bp Feature: domain Description: COG5361 Location: 2 43682 6-2 4382 45 bp Feature: gene Location: 2438706-2439998 bp Ori: ABU71388.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2438904-2439516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 438904-2 439516 bp Feature: domain Description: GIIM Note: maturase Location: 2439570-2439774 bp Feature: domain Description: GIIM Note: maturase Location: 2 439570-2 439774 bp Feature: gene Location: 2440667-2442115 bp Ori: ABU71389.1 Feature: domain Description: gnd Location: 2440679-2442077 bp Feature: domain Description: gnd Location: 2 440679-2 442 077 bp Feature: gene Location: 2442156-2442872 bp Ori: ABU71390.1 Feature: domain Description: NagB Location: 2442180-2442864 bp Feature: domain Description: NagB Location: 2 442 180-2 442 864 bp Feature: gene Location: 2504673-2505152 bp Ori: ABU71450.1 Feature: domain Description: Acetyltransf_1 Location: 2504823-2505093 bp Feature: domain Description: Acetyltransf_1 Location: 2 50482 3-2 505093 bp Feature: gene Location: 2505152-2505565 bp Feature: gene Location: 2505873-2507165 bp Ori: ABU71452.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2506071-2506683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 506071-2 506683 bp Feature: domain Description: GIIM Note: maturase Location: 2506737-2506938 bp Feature: domain Description: GIIM Note: maturase Location: 2 506737-2 506938 bp Feature: gene Location: 2508611-2509552 bp Ori: ABU71453.1 Feature: domain Description: metA Location: 2508614-2509514 bp Feature: domain Description: metA Location: 2 508614-2 509514 bp Feature: gene Location: 2509601-2510932 bp Ori: ABU71454.1 Feature: domain Description: Nterm_IS4 Location: 2509652-2509925 bp Feature: domain Description: Nterm_IS4 Location: 2 509652 -2 50992 5 bp Feature: domain Description: DDE_Tnp_1 Location: 2509979-2510672 bp Feature: domain Description: DDE_Tnp_1 Location: 2 509979-2 510672 bp Feature: gene Location: 2600004-2600201 bp Feature: gene Location: 2600188-2600484 bp Ori: ABU71543.1 Feature: domain Description: HTH_ARSR Location: 2600227-2600434 bp Feature: domain Description: HTH_ARSR Location: 2 6002 2 7-2 600434 bp Feature: gene Location: 2601137-2602651 bp Ori: ABU71544.1 Feature: domain Description: RVT_N Location: 2601227-2601470 bp Feature: domain Description: RVT_N Location: 2 6012 2 7-2 601470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2601515-2602142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 601515-2 602 142 bp Feature: domain Description: GIIM Note: maturase Location: 2602202-2602427 bp Feature: domain Description: GIIM Note: maturase Location: 2 602 2 02 -2 602 42 7 bp Feature: gene Location: 2603148-2606126 bp Ori: ABU71545.1 Feature: domain Description: MopB_Tetrathionate-Ra Location: 2603358-2605650 bp Feature: domain Description: MopB_Tetrathionate-Ra Location: 2 603358-2 605650 bp Feature: domain Description: PRK15488 Location: 2605695-2605944 bp Feature: domain Description: PRK15488 Location: 2 605695-2 605944 bp Feature: gene Location: 2606130-2607095 bp Feature: gene Location: 2668301-2669677 bp Ori: ABU71611.1 Feature: domain Description: MATE_like_8 Location: 2668352-2669666 bp Feature: domain Description: MATE_like_8 Location: 2 668352 -2 669666 bp Feature: gene Location: 2669773-2671218 bp Ori: ABU71612.1 Feature: domain Description: SDR_a2 Location: 2669785-2670655 bp Feature: domain Description: SDR_a2 Location: 2 669785-2 670655 bp Feature: domain Description: DUF2867 Location: 2670769-2671168 bp Feature: domain Description: DUF2 867 Location: 2 670769-2 671168 bp Feature: gene Location: 2671446-2672738 bp Ori: ABU71613.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2671644-2672256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 671644-2 672 2 56 bp Feature: domain Description: GIIM Note: maturase Location: 2672310-2672514 bp Feature: domain Description: GIIM Note: maturase Location: 2 672 310-2 672 514 bp Feature: gene Location: 2673362-2674024 bp Ori: ABU71614.1 Feature: domain Description: DUF2913 Location: 2673371-2674004 bp Feature: domain Description: DUF2 913 Location: 2 673371-2 674004 bp Feature: gene Location: 2674024-2675226 bp Ori: ABU71615.1 Feature: domain Description: PRK11102 Location: 2674102-2675221 bp Feature: domain Description: PRK11102 Location: 2 674102 -2 6752 2 1 bp Feature: gene Location: 2997495-2998208 bp Ori: ABU71924.1 Feature: domain Description: DDE_Tnp_1 Location: 2997774-2998206 bp Feature: domain Description: DDE_Tnp_1 Location: 2 997774-2 9982 06 bp Feature: gene Location: 2998258-2999565 bp Ori: ABU71925.1 Feature: domain Description: Nterm_IS4 Location: 2998309-2998579 bp Feature: domain Description: Nterm_IS4 Location: 2 998309-2 998579 bp Feature: domain Description: DDE_Tnp_1 Location: 2998639-2999308 bp Feature: domain Description: DDE_Tnp_1 Location: 2 998639-2 999308 bp Feature: gene Location: 2999613-3000905 bp Ori: ABU71926.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2999811-3000423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 999811-300042 3 bp Feature: domain Description: GIIM Note: maturase Location: 3000477-3000681 bp Feature: domain Description: GIIM Note: maturase Location: 3000477-3000681 bp Feature: gene Location: 3001548-3001709 bp Feature: gene Location: 3001718-3002161 bp Ori: ABU71928.1 Feature: domain Description: xerS Location: 3001808-3001976 bp Feature: domain Description: xerS Location: 3001808-3001976 bp Feature: gene Location: 3008263-3008490 bp Feature: gene Location: 3008870-3010003 bp Ori: ABU71937.1 Feature: domain Description: Tar Location: 3008936-3009995 bp Feature: domain Description: Tar Location: 3008936-3009995 bp Feature: gene Location: 3010749-3012221 bp Ori: ABU71938.1 Feature: domain Description: RVT_N Location: 3010797-3011037 bp Feature: domain Description: RVT_N Location: 3010797-3011037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3011085-3011712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3011085-3011712 bp Feature: domain Description: GIIM Note: maturase Location: 3011769-3011997 bp Feature: domain Description: GIIM Note: maturase Location: 3011769-3011997 bp Feature: gene Location: 3012833-3013222 bp Ori: ABU71939.1 Feature: domain Description: glyox_I Location: 3012836-3013214 bp Feature: domain Description: glyox_I Location: 3012 836-30132 14 bp Feature: gene Location: 3013360-3013794 bp Ori: ABU71940.1 Feature: domain Description: DUF2753 Location: 3013375-3013792 bp Feature: domain Description: DUF2 753 Location: 3013375-3013792 bp Feature: gene Location: 3032751-3033254 bp Ori: ABU71966.1 Feature: domain Description: Ribosomal_S4Pg Location: 3032754-3033243 bp Feature: domain Description: Ribosomal_S4Pg Location: 3032 754-30332 43 bp Feature: gene Location: 3033389-3034132 bp Ori: ABU71967.1 Feature: domain Description: PRK08862 Location: 3033452-3034130 bp Feature: domain Description: PRK08862 Location: 3033452 -3034130 bp Feature: gene Location: 3034220-3035512 bp Ori: ABU71968.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3034418-3035030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3034418-3035030 bp Feature: domain Description: GIIM Note: maturase Location: 3035084-3035288 bp Feature: domain Description: GIIM Note: maturase Location: 3035084-30352 88 bp Feature: gene Location: 3036169-3038871 bp Ori: ABU71969.1 Feature: domain Description: PRK13805 Location: 3036178-3038752 bp Feature: domain Description: PRK13805 Location: 3036178-3038752 bp Feature: gene Location: 3039521-3040159 bp Ori: ABU71970.1 Feature: domain Description: PRK11111 Location: 3039527-3040154 bp Feature: domain Description: PRK11111 Location: 303952 7-3040154 bp Feature: gene Location: 3049773-3050000 bp Ori: ABU71978.1 Feature: domain Description: PRK13689 Location: 3049776-3049998 bp Feature: domain Description: PRK13689 Location: 3049776-3049998 bp Feature: gene Location: 3050023-3051831 bp Ori: ABU71979.1 Feature: domain Description: YejM Location: 3050026-3051820 bp Feature: domain Description: YejM Location: 305002 6-305182 0 bp Feature: gene Location: 3052383-3053675 bp Ori: ABU71980.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3052581-3053193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3052 581-3053193 bp Feature: domain Description: GIIM Note: maturase Location: 3053247-3053451 bp Feature: domain Description: GIIM Note: maturase Location: 30532 47-3053451 bp Feature: gene Location: 3054285-3055646 bp Ori: ABU71981.1 Feature: domain Description: Nterm_IS4 Location: 3054390-3054660 bp Feature: domain Description: Nterm_IS4 Location: 3054390-3054660 bp Feature: domain Description: DDE_Tnp_1 Location: 3054720-3055389 bp Feature: domain Description: DDE_Tnp_1 Location: 305472 0-3055389 bp Feature: gene Location: 3055735-3056730 bp Ori: ABU71982.1 Feature: domain Description: M48C_Oma1_like Location: 3056068-3056722 bp Feature: domain Description: M48C_Oma1_like Location: 3056068-305672 2 bp Feature: gene Location: 3143129-3143593 bp Ori: ABU72066.1 Feature: domain Description: SixA Location: 3143132-3143588 bp Feature: domain Description: SixA Location: 3143132 -3143588 bp Feature: gene Location: 3144034-3146748 bp Ori: ABU72067.1 Feature: domain Description: Ptr Location: 3144037-3146674 bp Feature: domain Description: Ptr Location: 3144037-3146674 bp Feature: gene Location: 3147367-3148659 bp Ori: ABU72068.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3147565-3148177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3147565-3148177 bp Feature: domain Description: GIIM Note: maturase Location: 3148231-3148435 bp Feature: domain Description: GIIM Note: maturase Location: 31482 31-3148435 bp Feature: gene Location: 3148708-3150822 bp Ori: ABU72069.1 Feature: domain Description: fadJ Location: 3148714-3150820 bp Feature: domain Description: fadJ Location: 3148714-315082 0 bp Feature: gene Location: 3150822-3152129 bp Ori: ABU72070.1 Feature: domain Description: FadI Location: 3150840-3152127 bp Feature: domain Description: FadI Location: 3150840-3152 12 7 bp Feature: gene Location: 3290053-3290181 bp Feature: gene Location: 3290174-3291385 bp Ori: ABU72213.1 Feature: domain Description: PleD Location: 3290183-3290480 bp Feature: domain Description: PleD Location: 32 90183-32 90480 bp Feature: domain Description: PleD Location: 3290534-3291377 bp Feature: domain Description: PleD Location: 32 90534-32 91377 bp Feature: gene Location: 3291442-3292734 bp Ori: ABU72214.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3291640-3292252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 91640-32 92 2 52 bp Feature: domain Description: GIIM Note: maturase Location: 3292306-3292507 bp Feature: domain Description: GIIM Note: maturase Location: 32 92 306-32 92 507 bp Feature: gene Location: 3293341-3294720 bp Ori: ABU72215.1 Feature: domain Description: Tnp_DNA_bind Location: 3293368-3293536 bp Feature: domain Description: Tnp_DNA_bind Location: 32 93368-32 93536 bp Feature: domain Description: DDE_Tnp_1 Location: 3294010-3294412 bp Feature: domain Description: DDE_Tnp_1 Location: 32 94010-32 94412 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 3294448-3294703 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 32 94448-32 94703 bp Feature: gene Location: 3294865-3295098 bp Ori: ABU72216.1 Feature: domain Description: COG2991 Location: 3294868-3295081 bp Feature: domain Description: COG2 991 Location: 32 94868-32 95081 bp Feature: gene Location: 3528237-3528437 bp Ori: ABU72419.1 Feature: domain Description: PRK00418 Location: 3528246-3528429 bp Feature: domain Description: PRK00418 Location: 352 82 46-352 842 9 bp Feature: gene Location: 3528892-3529917 bp Ori: ABU72420.1 Feature: domain Description: COG3547 Location: 3528910-3529867 bp Feature: domain Description: COG3547 Location: 352 8910-352 9867 bp Feature: gene Location: 3530150-3531364 bp Ori: ABU72421.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3530348-3530873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3530348-3530873 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3530906-3531119 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3530906-3531119 bp Feature: gene Location: 3531984-3532337 bp Ori: ABU72422.1 Feature: domain Description: rplS Location: 3531993-3532329 bp Feature: domain Description: rplS Location: 3531993-3532 32 9 bp Feature: gene Location: 3532379-3533122 bp Ori: ABU72423.1 Feature: domain Description: trmD Location: 3532382-3533081 bp Feature: domain Description: trmD Location: 3532 382 -3533081 bp Feature: gene Location: 3680157-3680618 bp Ori: ABU72562.1 Feature: domain Description: PRK00893 Location: 3680166-3680613 bp Feature: domain Description: PRK00893 Location: 3680166-3680613 bp Feature: gene Location: 3680784-3681173 bp Ori: ABU72563.1 Feature: domain Description: PRK11401 Location: 3680787-3681168 bp Feature: domain Description: PRK11401 Location: 3680787-3681168 bp Feature: gene Location: 3681226-3682440 bp Ori: ABU72564.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3681424-3681949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368142 4-3681949 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3681982-3682195 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3681982 -3682 195 bp Feature: gene Location: 3683071-3683796 bp Ori: ABU72565.1 Feature: domain Description: PRK15018 Location: 3683074-3683794 bp Feature: domain Description: PRK15018 Location: 3683074-3683794 bp Feature: gene Location: 3683944-3685209 bp Ori: ABU72566.1 Feature: domain Description: MurA Location: 3683947-3685201 bp Feature: domain Description: MurA Location: 3683947-36852 01 bp Feature: gene Location: 3695918-3696193 bp Ori: ABU72582.1 Feature: domain Description: PRK10897 Location: 3695930-3696185 bp Feature: domain Description: PRK10897 Location: 3695930-3696185 bp Feature: gene Location: 3696360-3697715 bp Ori: ABU72583.1 Feature: domain Description: MgtE Location: 3696399-3697710 bp Feature: domain Description: MgtE Location: 3696399-3697710 bp Feature: gene Location: 3697778-3699070 bp Ori: ABU72584.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3697976-3698588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3697976-3698588 bp Feature: domain Description: GIIM Note: maturase Location: 3698642-3698846 bp Feature: domain Description: GIIM Note: maturase Location: 3698642 -3698846 bp Feature: gene Location: 3699689-3701032 bp Ori: ABU72585.1 Feature: domain Description: PRK11040 Location: 3699692-3701030 bp Feature: domain Description: PRK11040 Location: 3699692 -3701030 bp Feature: gene Location: 3701143-3701667 bp Ori: ABU72586.1 Feature: domain Description: YjgA Location: 3701173-3701659 bp Feature: domain Description: YjgA Location: 3701173-3701659 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SapB (smart00741), RVT-GII, GIIM (pfam08388), groEL (PRK12852), groES (PRK14533), plsB (TIGR03703), ubiA (PRK13595), Chor_lyase (pfam04345), PRK11031 (guanosine-5'-triphosphate,3'-diphosphate diphosphatase), PRK11212 (7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter)
DUF3630 (pfam12305), RhtB (COG1280), Ggt (COG0405), uvrD (TIGR01075), DUF2282 (pfam10048), PRK11570 (peptidyl-prolyl cis-trans isomerase; Provisional), OapA (pfam04225), RhaT (TIGR00776), ElaA (COG2153), chitinase_GH19 (cd00325)
COG3979 (Chitodextrinase ), ChtBD3 (smart00495), PRK10659 (acetate uptake transporter), AlsT (COG1115), PRK11139 (DNA-binding transcriptional activator GcvA; Provisional), MS_channel (pfam00924), HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358), RVT_N (pfam13655)
PHA02517 (putative transposase OrfB; Reviewed), flgI (PRK12789), flagell_FlgJ (TIGR02541), flgK (PRK12715), flgL (PRK12718), HTH_23 (pfam13384), PRK09439 (PTS system glucose-specific transporter subunit; Provisional), PRK11177 (phosphoenolpyruvate-protein phosphotransferase PtsI), Big_1 (pfam02369), RVT-CRISPR
DDE_Tnp_1 (pfam01609), BioC (TIGR02072), PRK12374 (ATP-dependent dethiobiotin synthetase BioD), PRK05457 (protease HtpX), cysS (TIGR00435), PRK04296 (thymidine kinase; Provisional), YdcF-like (cl00630), SDR_a4 (cd05266), YecT (COG3755), Nudix_Hydrolase_6 (cd04663)
LysR_substrate (pfam03466), COG5361 (Uncharacterized conserved protein ), gnd (TIGR00873), NagB (COG0363), Acetyltransf_1 (pfam00583), metA (TIGR01001), Nterm_IS4 (pfam13006), HTH_ARSR (smart00418), MopB_Tetrathionate-Ra (cd02758), PRK15488 (thiosulfate reductase PhsA; Provisional)
MATE_like_8 (cd13134), SDR_a2 (cd05245), DUF2867 (pfam11066), DUF2913 (pfam11140), PRK11102 (Bcr/CflA family multidrug efflux MFS transporter), xerS (PRK05084), Tar (COG0840), glyox_I (TIGR00068), DUF2753 (pfam10952), Ribosomal_S4Pg (pfam11993)
PRK08862 (SDR family oxidoreductase), PRK13805 (bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional), PRK11111 (YchE family NAAT transporter), PRK13689 (hypothetical protein; Provisional), YejM (COG3083), M48C_Oma1_like (cd07342), SixA (COG2062), Ptr (COG1025), fadJ (PRK11154), FadI (TIGR02446)
PleD (COG3706), Tnp_DNA_bind (pfam14706), Dimer_Tnp_Tn5 (pfam02281), COG2991 (Uncharacterized protein ), PRK00418 (DNA gyrase inhibitor YacG), COG3547 (Transposase ), group_II_RT_mat (TIGR04416), rplS (PRK05338), trmD (TIGR00088), PRK00893 (aspartate carbamoyltransferase regulatory subunit; Reviewed)
PRK11401 (enamine/imine deaminase), PRK15018 (1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional), MurA (COG0766), PRK10897 (PTS phosphocarrier protein NPr), MgtE (pfam01769), PRK11040 (peptidase PmbA; Provisional), YjgA (COG3028)

Seq: CP000790.1 Vibrio campbellii ATCC BAA-1116 chromosome II, complete sequence (2204018 bp)
Overview 1 RT 1: 61923-64455 bp 2 RT 2: 675768-680444 bp 3 RT 3: 1103863-1109362 bp 4 RT 4: 1224726-1227452 bp 5 RT 5: 1339055-1344517 bp 6 RT 6: 1492052-1494352 bp 7 RT 7: 1500111-1505567 bp 8 RT 8: 1549833-1553156 bp 9 RT 9: 1615036-1621024 bp 10 RT 10: 1738574-1744579 bp 11 RT 11: 1756350-1759064 bp 12 RT 12: 1882480-1886244 bp 13 RT 13: 1898499-1900347 bp 14 RT 14: 1918465-1921046 bp 15 RT 15: 1975258-1980131 bp 16 RT 16: 2077173-2079738 bp Neighborhood of RT #1 [61923, 64460] RVT-GII GIIM DUF2541 COG3324 Neighborhood of RT #2 [675768, 680458] RVT-GII GIIM ccoP CccA CccA ccoP PRK14487 Neighborhood of RT #3 [1103863, 1109362] UshA DUF2813 TOPRIM_OLD RVT-GII GIIM Neighborhood of RT #4 [1224726, 1227452] PRK09272 RVT-GII GIIM YigB Neighborhood of RT #5 [1339055, 1344543] PRK11107 RVT_N RVT-GII GIIM TMAO_torS MauG Neighborhood of RT #6 [1492052, 1494352] RVT-GII GIIM Neighborhood of RT #7 [1500111, 1505567] Redoxin RVT-GII GIIM DDE_Tnp_1 DDE_Tnp_1 DDE_Tnp_1 RVT-GII Neighborhood of RT #8 [1549833, 1553179] PRK15130 RVT-GII GIIM DDE_Tnp_1_5 group_II_RT_mat Neighborhood of RT #9 [1615036, 1621035] RVT_N RVT-GII DDE_Tnp_1 RVT-GII GIIM BKR_SDR_c DUF1800 Neighborhood of RT #10 [1738574, 1744614] RVT_N RVT-GII GIIM Glyco_hydro_92 COG3537 Neighborhood of RT #11 [1756350, 1759064] DUF2000 RVT-GII GIIM Neighborhood of RT #12 [1882480, 1886252] PepSY_TM_like_2 RVT_N RVT-GII GIIM PepSY_TM_like_2 YdiL Neighborhood of RT #13 [1898499, 1900347] PRK11020 RVT-GII Neighborhood of RT #14 [1918465, 1921046] RVT_N RVT-GII GIIM fis Neighborhood of RT #15 [1975258, 1980142] RVT_N RVT-GII GIIM PepF DUF924 Neighborhood of RT #16 [2077173, 2079738] YitT RVT-GII GIIM Feature: gene Location: 61923-62111 bp Feature: gene Location: 62276-62410 bp Feature: gene Location: 62419-63711 bp Ori: ABU72709.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62617-63229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62617-63 229 bp Feature: domain Description: GIIM Note: maturase Location: 63283-63487 bp Feature: domain Description: GIIM Note: maturase Location: 63 283 -63 487 bp Feature: gene Location: 63796-64182 bp Ori: ABU72710.1 Feature: domain Description: DUF2541 Location: 63817-64141 bp Feature: domain Description: DUF2541 Location: 63 817-64141 bp Feature: gene Location: 64344-64460 bp Ori: ABU72711.1 Feature: domain Description: COG3324 Location: 64350-64455 bp Feature: domain Description: COG3 3 24 Location: 643 50-64455 bp Feature: gene Location: 675768-675956 bp Feature: gene Location: 676121-676255 bp Feature: gene Location: 676264-677556 bp Ori: ABU73367.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 676462-677074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 676462-677074 bp Feature: domain Description: GIIM Note: maturase Location: 677128-677332 bp Feature: domain Description: GIIM Note: maturase Location: 677128-6773 3 2 bp Feature: gene Location: 677694-679850 bp Ori: ABU73368.1 Feature: domain Description: ccoP Location: 677790-678567 bp Feature: domain Description: ccoP Location: 677790-678567 bp Feature: domain Description: CccA Location: 678579-678684 bp Feature: domain Description: CccA Location: 678579-678684 bp Feature: domain Description: CccA Location: 678837-679236 bp Feature: domain Description: CccA Location: 67883 7-67923 6 bp Feature: domain Description: ccoP Location: 679464-679752 bp Feature: domain Description: ccoP Location: 679464-679752 bp Feature: gene Location: 679847-680458 bp Ori: ABU73369.1 Feature: domain Description: PRK14487 Location: 679862-680444 bp Feature: domain Description: PRK14487 Location: 679862-680444 bp Feature: gene Location: 1103863-1105620 bp Ori: ABU73807.1 Feature: domain Description: UshA Location: 1103881-1105573 bp Feature: domain Description: UshA Location: 1103 881-1105573 bp Feature: gene Location: 1105879-1107513 bp Ori: ABU73808.1 Feature: domain Description: DUF2813 Location: 1105882-1106989 bp Feature: domain Description: DUF2813 Location: 1105882-1106989 bp Feature: domain Description: TOPRIM_OLD Location: 1106992-1107235 bp Feature: domain Description: TOPRIM_OLD Location: 1106992-110723 5 bp Feature: gene Location: 1107574-1108866 bp Ori: ABU73809.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1107772-1108384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1107772-11083 84 bp Feature: domain Description: GIIM Note: maturase Location: 1108438-1108642 bp Feature: domain Description: GIIM Note: maturase Location: 110843 8-1108642 bp Feature: gene Location: 1108875-1109009 bp Feature: gene Location: 1109174-1109362 bp Feature: gene Location: 1224726-1224848 bp Feature: gene Location: 1224869-1225219 bp Ori: ABU73941.1 Feature: domain Description: PRK09272 Location: 1224878-1225193 bp Feature: domain Description: PRK09272 Location: 1224878-1225193 bp Feature: gene Location: 1225646-1226299 bp Ori: ABU73942.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1225649-1225868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1225649-1225868 bp Feature: domain Description: GIIM Note: maturase Location: 1225922-1226126 bp Feature: domain Description: GIIM Note: maturase Location: 1225922-1226126 bp Feature: gene Location: 1226423-1227085 bp Ori: ABU73943.1 Feature: domain Description: YigB Location: 1226429-1227035 bp Feature: domain Description: YigB Location: 1226429-122703 5 bp Feature: gene Location: 1227093-1227452 bp Feature: gene Location: 1339055-1339711 bp Ori: ABU74056.1 Feature: domain Description: PRK11107 Location: 1339058-1339607 bp Feature: domain Description: PRK11107 Location: 13 3 9058-13 3 9607 bp Feature: gene Location: 1340136-1340303 bp Feature: gene Location: 1340300-1341772 bp Ori: ABU74058.1 Feature: domain Description: RVT_N Location: 1340348-1340588 bp Feature: domain Description: RVT_N Location: 13 403 48-13 40588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1340636-1341263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 4063 6-13 41263 bp Feature: domain Description: GIIM Note: maturase Location: 1341320-1341548 bp Feature: domain Description: GIIM Note: maturase Location: 13 413 20-13 41548 bp Feature: gene Location: 1341795-1343579 bp Ori: ABU74059.1 Feature: domain Description: TMAO_torS Location: 1342524-1343493 bp Feature: domain Description: TMAO_torS Location: 13 42524-13 43 493 bp Feature: gene Location: 1343572-1344543 bp Ori: ABU74060.1 Feature: domain Description: MauG Location: 1343707-1344517 bp Feature: domain Description: MauG Location: 13 43 707-13 44517 bp Feature: gene Location: 1492052-1492363 bp Feature: gene Location: 1492408-1492518 bp Feature: gene Location: 1492564-1493856 bp Ori: ABU74208.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1492762-1493374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1492762-1493 3 74 bp Feature: domain Description: GIIM Note: maturase Location: 1493428-1493632 bp Feature: domain Description: GIIM Note: maturase Location: 1493 428-1493 63 2 bp Feature: gene Location: 1493865-1493999 bp Feature: gene Location: 1494164-1494352 bp Feature: gene Location: 1500111-1500245 bp Feature: gene Location: 1500487-1501026 bp Ori: ABU74219.1 Feature: domain Description: Redoxin Location: 1500511-1500928 bp Feature: domain Description: Redoxin Location: 1500511-1500928 bp Feature: gene Location: 1501099-1501776 bp Ori: ABU74220.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1501120-1501294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1501120-1501294 bp Feature: domain Description: GIIM Note: maturase Location: 1501348-1501552 bp Feature: domain Description: GIIM Note: maturase Location: 15013 48-1501552 bp Feature: gene Location: 1501876-1502670 bp Ori: ABU74221.1 Feature: domain Description: DDE_Tnp_1 Location: 1502302-1502476 bp Feature: domain Description: DDE_Tnp_1 Location: 15023 02-1502476 bp Feature: gene Location: 1502671-1503048 bp Ori: ABU74222.1 Feature: domain Description: DDE_Tnp_1 Location: 1502677-1502791 bp Feature: domain Description: DDE_Tnp_1 Location: 1502677-1502791 bp Feature: gene Location: 1503161-1504354 bp Ori: ABU74223.1 Feature: domain Description: DDE_Tnp_1 Location: 1503587-1504076 bp Feature: domain Description: DDE_Tnp_1 Location: 1503 587-1504076 bp Feature: gene Location: 1504427-1505071 bp Ori: ABU74224.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1504625-1505066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1504625-1505066 bp Feature: gene Location: 1505080-1505214 bp Feature: gene Location: 1505379-1505567 bp Feature: gene Location: 1549833-1550051 bp Feature: gene Location: 1550257-1550787 bp Ori: ABU74269.1 Feature: domain Description: PRK15130 Location: 1550272-1550776 bp Feature: domain Description: PRK1513 0 Location: 1550272-1550776 bp Feature: gene Location: 1550823-1551926 bp Ori: ABU74270.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1550832-1551444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155083 2-1551444 bp Feature: domain Description: GIIM Note: maturase Location: 1551498-1551702 bp Feature: domain Description: GIIM Note: maturase Location: 1551498-1551702 bp Feature: gene Location: 1552015-1552935 bp Ori: ABU74271.1 Feature: domain Description: DDE_Tnp_1_5 Location: 1552072-1552402 bp Feature: domain Description: DDE_Tnp_1_5 Location: 1552072-1552402 bp Feature: gene Location: 1553000-1553179 bp Ori: ABU74272.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 1553024-1553156 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1553 024-1553 156 bp Feature: gene Location: 1615036-1615149 bp Feature: gene Location: 1615237-1615419 bp Feature: gene Location: 1615355-1615963 bp Ori: ABU74349.1 Feature: domain Description: RVT_N Location: 1615445-1615688 bp Feature: domain Description: RVT_N Location: 1615445-1615688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1615733-1615958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161573 3 -1615958 bp Feature: gene Location: 1616076-1617269 bp Ori: ABU74350.1 Feature: domain Description: DDE_Tnp_1 Location: 1616502-1616991 bp Feature: domain Description: DDE_Tnp_1 Location: 1616502-1616991 bp Feature: gene Location: 1617274-1618209 bp Ori: ABU74351.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1617292-1617700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1617292-1617700 bp Feature: domain Description: GIIM Note: maturase Location: 1617760-1617985 bp Feature: domain Description: GIIM Note: maturase Location: 1617760-1617985 bp Feature: gene Location: 1618393-1619112 bp Ori: ABU74352.1 Feature: domain Description: BKR_SDR_c Location: 1618408-1619107 bp Feature: domain Description: BKR_SDR_c Location: 1618408-1619107 bp Feature: gene Location: 1619551-1621035 bp Ori: ABU74353.1 Feature: domain Description: DUF1800 Location: 1619584-1621024 bp Feature: domain Description: DUF1800 Location: 1619584-1621024 bp Feature: gene Location: 1738574-1738687 bp Feature: gene Location: 1738790-1738957 bp Feature: gene Location: 1738938-1740407 bp Ori: ABU74487.1 Feature: domain Description: RVT_N Location: 1738983-1739226 bp Feature: domain Description: RVT_N Location: 173 8983 -173 9226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1739271-1739898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173 9271-173 9898 bp Feature: domain Description: GIIM Note: maturase Location: 1739958-1740183 bp Feature: domain Description: GIIM Note: maturase Location: 173 9958-1740183 bp Feature: gene Location: 1740456-1742060 bp Ori: ABU74488.1 Feature: domain Description: Glyco_hydro_92 Location: 1740579-1741959 bp Feature: domain Description: Glyco_hydro_92 Location: 1740579-1741959 bp Feature: gene Location: 1742188-1744614 bp Ori: ABU74489.1 Feature: domain Description: COG3537 Location: 1742203-1744579 bp Feature: domain Description: COG3 53 7 Location: 1742203 -1744579 bp Feature: gene Location: 1756350-1756508 bp Feature: gene Location: 1756729-1757160 bp Ori: ABU74499.1 Feature: domain Description: DUF2000 Location: 1756759-1757158 bp Feature: domain Description: DUF2000 Location: 1756759-1757158 bp Feature: gene Location: 1757276-1758568 bp Ori: ABU74500.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1757474-1758086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1757474-1758086 bp Feature: domain Description: GIIM Note: maturase Location: 1758140-1758344 bp Feature: domain Description: GIIM Note: maturase Location: 1758140-17583 44 bp Feature: gene Location: 1758577-1758711 bp Feature: gene Location: 1758876-1759064 bp Feature: gene Location: 1882480-1882965 bp Ori: ABU74633.1 Feature: domain Description: PepSY_TM_like_2 Location: 1882519-1882963 bp Feature: domain Description: PepSY_TM_like_2 Location: 1882519-1882963 bp Feature: gene Location: 1883347-1883514 bp Feature: gene Location: 1883511-1884983 bp Ori: ABU74635.1 Feature: domain Description: RVT_N Location: 1883559-1883799 bp Feature: domain Description: RVT_N Location: 1883 559-1883 799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1883847-1884474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1883 847-1884474 bp Feature: domain Description: GIIM Note: maturase Location: 1884531-1884759 bp Feature: domain Description: GIIM Note: maturase Location: 188453 1-1884759 bp Feature: gene Location: 1885085-1885210 bp Ori: ABU74636.1 Feature: domain Description: PepSY_TM_like_2 Location: 1885088-1885202 bp Feature: domain Description: PepSY_TM_like_2 Location: 1885088-1885202 bp Feature: gene Location: 1885407-1886252 bp Ori: ABU74637.1 Feature: domain Description: YdiL Location: 1885551-1886244 bp Feature: domain Description: YdiL Location: 1885551-1886244 bp Feature: gene Location: 1898499-1898594 bp Feature: gene Location: 1898587-1898943 bp Ori: ABU74651.1 Feature: domain Description: PRK11020 Location: 1898590-1898941 bp Feature: domain Description: PRK11020 Location: 1898590-1898941 bp Feature: gene Location: 1899159-1899851 bp Ori: ABU74653.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1899357-1899438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18993 57-189943 8 bp Feature: gene Location: 1899860-1899994 bp Feature: gene Location: 1900159-1900347 bp Feature: gene Location: 1918465-1918578 bp Feature: gene Location: 1918681-1918848 bp Feature: gene Location: 1918829-1920298 bp Ori: ABU74681.1 Feature: domain Description: RVT_N Location: 1918874-1919117 bp Feature: domain Description: RVT_N Location: 1918874-1919117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1919162-1919789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1919162-1919789 bp Feature: domain Description: GIIM Note: maturase Location: 1919849-1920074 bp Feature: domain Description: GIIM Note: maturase Location: 1919849-1920074 bp Feature: gene Location: 1920566-1920853 bp Ori: ABU74682.1 Feature: domain Description: fis Location: 1920707-1920806 bp Feature: domain Description: fis Location: 1920707-1920806 bp Feature: gene Location: 1920840-1921046 bp Feature: gene Location: 1975258-1975452 bp Feature: gene Location: 1975846-1976013 bp Feature: gene Location: 1976010-1977482 bp Ori: ABU74744.1 Feature: domain Description: RVT_N Location: 1976058-1976298 bp Feature: domain Description: RVT_N Location: 1976058-1976298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1976346-1976973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19763 46-1976973 bp Feature: domain Description: GIIM Note: maturase Location: 1977030-1977258 bp Feature: domain Description: GIIM Note: maturase Location: 197703 0-1977258 bp Feature: gene Location: 1977701-1979548 bp Ori: ABU74745.1 Feature: domain Description: PepF Location: 1977752-1979537 bp Feature: domain Description: PepF Location: 1977752-197953 7 bp Feature: gene Location: 1979606-1980142 bp Ori: ABU74746.1 Feature: domain Description: DUF924 Location: 1979621-1980131 bp Feature: domain Description: DUF924 Location: 1979621-198013 1 bp Feature: gene Location: 2077173-2077301 bp Feature: gene Location: 2077287-2077895 bp Ori: ABU74868.1 Feature: domain Description: YitT Location: 2077317-2077869 bp Feature: domain Description: YitT Location: 20773 17-2077869 bp Feature: gene Location: 2077950-2079242 bp Ori: ABU74870.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2078148-2078760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2078148-2078760 bp Feature: domain Description: GIIM Note: maturase Location: 2078814-2079018 bp Feature: domain Description: GIIM Note: maturase Location: 2078814-2079018 bp Feature: gene Location: 2079251-2079385 bp Feature: gene Location: 2079550-2079738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF2541 (pfam10807), COG3324 (Predicted enzyme related to lactoylglutathione lyase ), ccoP (TIGR00782), CccA (COG2010), PRK14487 (cbb3-type cytochrome c oxidase subunit II; Provisional), UshA (COG0737), DUF2813 (pfam11398), TOPRIM_OLD (cd01026)
PRK09272 (hypothetical protein; Provisional), YigB (COG1011), PRK11107 (hybrid sensory histidine kinase BarA; Provisional), RVT_N (pfam13655), TMAO_torS (TIGR02956), MauG (COG1858), Redoxin (pfam08534), DDE_Tnp_1 (pfam01609), PRK15130 (spermidine N1-acetyltransferase; Provisional), DDE_Tnp_1_5 (pfam13737)
group_II_RT_mat (TIGR04416), BKR_SDR_c (cd05333), DUF1800 (pfam08811), Glyco_hydro_92 (pfam07971), COG3537 (Putative alpha-1,2-mannosidase ), DUF2000 (pfam09391), PepSY_TM_like_2 (pfam16357), YdiL (COG1266), PRK11020 (YibL family ribosome-associated protein), fis (PRK00430)
PepF (COG1164), DUF924 (pfam06041), YitT (COG1284)