myRT

myRT report for GCA_000017965.1_ASM1796v1

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Seq: CP000818.1 Lysinibacillus sphaericus C3-41 plasmid pBsph, complete sequence (177642 bp)
Overview 1 RT 1: 100641-106184 bp Neighborhood of RT #1 [100641, 106198] AbrB RVT-GII HNHc Csh2 Feature: gene Location: 100641-100967 bp Ori: ACA42343.1 Gene: abrB Feature: domain Description: AbrB Location: 100674-100932 bp Feature: domain Description: AbrB Location: 1 00674-1 00932 bp Feature: gene Location: 101068-101361 bp Feature: gene Location: 101388-103193 bp Ori: ACA42345.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101685-102384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 685-1 02384 bp Feature: domain Description: HNHc Note: nucleases Location: 102942-103080 bp Feature: domain Description: HNHc Note: nucleases Location: 1 02942-1 03080 bp Feature: gene Location: 103952-104116 bp Feature: gene Location: 105341-106198 bp Ori: ACA42347.1 Feature: domain Description: Csh2 Location: 105371-106184 bp Feature: domain Description: Csh2 Location: 1 05371 -1 061 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbrB (pfam05145), RVT-GII, HNHc (smart00507), Csh2 (COG3649)

Seq: CP000817.1 Lysinibacillus sphaericus C3-41, complete genome (4639821 bp)
Overview 1 RT 1: 3906004-3912105 bp Neighborhood of RT #1 [3906004, 3912113] RVT-GII HNHc A3DFK9-like_SDR_c Feature: gene Location: 3906004-3906699 bp Feature: gene Location: 3907075-3907377 bp Feature: gene Location: 3907987-3909792 bp Ori: ACA41506.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3908284-3908983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39082 84-3908983 bp Feature: domain Description: HNHc Note: nucleases Location: 3909541-3909679 bp Feature: domain Description: HNHc Note: nucleases Location: 3909541-3909679 bp Feature: gene Location: 3910513-3910683 bp Feature: gene Location: 3911367-3912113 bp Ori: ACA41508.1 Feature: domain Description: A3DFK9-like_SDR_c Location: 3911382-3912105 bp Feature: domain Description: A3DFK9-like_SDR_c Location: 3911382 -3912 105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), A3DFK9-like_SDR_c (cd09761)