myRT

myRT report for GCA_000018145.1_ASM1814v1

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Seq: CP000831.1 Dinoroseobacter shibae DFL 12 plasmid pDSHI01, complete sequence (190506 bp)
Overview 1 RT 1: 50623-58045 bp Neighborhood of RT #1 [50623, 59706] pP_pnuc_1 PRK14975 RVT-UG9 PRK13850 PRK13863 Feature: gene Location: 50623-51540 bp Ori: ABV95385.1 Feature: domain Description: pP_pnuc_1 Location: 51103-51502 bp Feature: domain Description: pP_pnuc_1 Location: 51 1 03-51 502 bp Feature: gene Location: 51856-53406 bp Ori: ABV95386.1 Gene: polA Feature: domain Description: PRK14975 Location: 52243-53350 bp Feature: domain Description: PRK1 4975 Location: 52243-53350 bp Feature: gene Location: 53399-55099 bp Ori: ABV95387.1 Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 53669-54302 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 53669-54302 bp Feature: gene Location: 55361-57364 bp Ori: ABV95388.1 Gene: virD1 Feature: domain Description: PRK13850 Location: 55400-57011 bp Feature: domain Description: PRK1 3850 Location: 55400-5701 1 bp Feature: gene Location: 57373-59706 bp Ori: ABV95389.1 Gene: virD2 Feature: domain Description: PRK13863 Location: 57520-58045 bp Feature: domain Description: PRK1 3863 Location: 57520-58045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pP_pnuc_1 (pfam18165), PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), RVT-UG9, PRK13850 (type IV secretion system protein VirD4; Provisional), PRK13863 (T-DNA border endonuclease VirD2)