myRT

myRT report for GCA_000018545.1_ASM1854v1

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Seq: CP000874.1 Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence (2430033 bp)
Overview 1 RT 1: 798309-803579 bp Neighborhood of RT #1 [798309, 803710] rve DDE_3 RVT-GII GIIM COG5659 DDE_5 Feature: gene Location: 798309-799823 bp Ori: ACP22255.1 Feature: domain Description: rve Location: 798690-799080 bp Feature: domain Description: rve Location: 798690-799080 bp Feature: gene Location: 799990-800430 bp Ori: ACP22256.1 Feature: domain Description: DDE_3 Location: 800014-800338 bp Feature: domain Description: DDE_3 Location: 80001 4-800338 bp Feature: gene Location: 800478-801770 bp Ori: ACP22257.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 800727-801381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 800727-801 381 bp Feature: domain Description: GIIM Note: maturase Location: 801462-801684 bp Feature: domain Description: GIIM Note: maturase Location: 801 462-801 684 bp Feature: gene Location: 802534-802974 bp Ori: ACP22258.1 Feature: domain Description: COG5659 Location: 802675-802897 bp Feature: domain Description: COG5659 Location: 802675-802897 bp Feature: gene Location: 802925-803710 bp Ori: ACP22259.1 Feature: domain Description: DDE_5 Location: 803003-803579 bp Feature: domain Description: DDE_5 Location: 803003-803579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388), COG5659 (SRSO17 transposase ), DDE_5 (pfam13546)

Seq: CP001389.1 Sinorhizobium fredii NGR234, complete genome (3925702 bp)
Overview 1 RT 1: 2009712-2015272 bp Neighborhood of RT #1 [2009712, 2015295] PBP2_Fbp_like_2 RVT-UG12 PRK10983 RND_mfp Feature: gene Location: 2009712-2010692 bp Ori: ACP25718.1 Feature: domain Description: PBP2_Fbp_like_2 Location: 2009790-2010555 bp Feature: domain Description: PBP2 _Fbp_like_2 Location: 2 009790-2 010555 bp Feature: gene Location: 2010843-2011421 bp Feature: gene Location: 2011867-2012523 bp Ori: ACP25720.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2012272-2012500 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2 012 2 72 -2 012 500 bp Feature: gene Location: 2012897-2014009 bp Ori: ACP25721.1 Feature: domain Description: PRK10983 Location: 2012990-2014001 bp Feature: domain Description: PRK10983 Location: 2 012 990-2 014001 bp Feature: gene Location: 2014177-2015295 bp Ori: ACP25722.1 Feature: domain Description: RND_mfp Location: 2014291-2015272 bp Feature: domain Description: RND_mfp Location: 2 0142 91-2 0152 72 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_Fbp_like_2 (cd13547), RVT-UG12, PRK10983 (AI-2E family transporter YdiK), RND_mfp (TIGR01730)