myRT

myRT report for GCA_000019545.1_ASM1954v1

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Seq: CP000962.1 Clostridium botulinum A3 str. Loch Maree, complete genome (3992906 bp)
Overview 1 RT 1: 2349001-2357173 bp Neighborhood of RT #1 [2349001, 2357421] RVT-UG24 HNH_4 Feature: gene Location: 2349001-2349132 bp Feature: gene Location: 2349415-2350440 bp Feature: gene Location: 2352044-2355301 bp Ori: ACA53940.1 Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 2352545-2353010 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 2352545-235301 0 bp Feature: gene Location: 2355294-2355896 bp Feature: gene Location: 2356252-2357421 bp Ori: ACA55156.1 Feature: domain Description: HNH_4 Location: 2357020-2357173 bp Feature: domain Description: HNH_4 Location: 2357020-23571 73 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG24, HNH_4 (pfam13395)

Seq: CP000963.1 Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence (266785 bp)
Overview 1 RT 1: 79476-83371 bp Neighborhood of RT #1 [79476, 83371] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 79476-79922 bp Feature: gene Location: 79956-80321 bp Feature: gene Location: 80462-82285 bp Ori: ACA57421.1 Feature: domain Description: RVT_N Location: 80519-80765 bp Feature: domain Description: RVT_N Location: 80519-80765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80819-81473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80819-81473 bp Feature: domain Description: GIIM Note: maturase Location: 81536-81770 bp Feature: domain Description: GIIM Note: maturase Location: 81536-81770 bp Feature: domain Description: HNHc Note: nucleases Location: 81977-82142 bp Feature: domain Description: HNHc Note: nucleases Location: 81977-82 142 bp Feature: gene Location: 82888-83163 bp Feature: gene Location: 83222-83371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)