myRT

myRT report for GCA_000019925.1_ASM1992v1

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Seq: CP001026.1 Burkholderia ambifaria MC40-6 chromosome 2, complete sequence (2769414 bp)
Overview 1 RT 1: 68943-74551 bp Neighborhood of RT #1 [68943, 75477] SLATT_5 RVT-UG17 Trypsin_2 Trypsin_2 Feature: gene Location: 68943-69656 bp Feature: gene Location: 69936-70568 bp Ori: ACB65644.1 Feature: domain Description: SLATT_5 Location: 69981-70548 bp Feature: domain Description: SLATT_5 Location: 69981 -70548 bp Feature: gene Location: 70565-71965 bp Ori: ACB65645.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 70802-71399 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 70802-71 399 bp Feature: gene Location: 72402-73571 bp Ori: ACB65646.1 Feature: domain Description: Trypsin_2 Location: 72879-73398 bp Feature: domain Description: Trypsin_2 Location: 72879-73398 bp Feature: gene Location: 73576-75477 bp Ori: ACB65647.1 Feature: domain Description: Trypsin_2 Location: 73978-74551 bp Feature: domain Description: Trypsin_2 Location: 73978-74551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Trypsin_2 (pfam13365)

Seq: CP001028.1 Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence (301592 bp)
Overview 1 RT 1: 129176-136849 bp Neighborhood of RT #1 [129176, 136860] PRK09926 FimD RVT-UG4 FimA Tra8 Feature: gene Location: 129176-129928 bp Ori: ACB69053.1 Feature: domain Description: PRK09926 Location: 129203-129917 bp Feature: domain Description: PRK0992 6 Location: 12 92 03-12 9917 bp Feature: gene Location: 130037-132691 bp Ori: ACB69054.1 Feature: domain Description: FimD Location: 130067-132575 bp Feature: domain Description: FimD Location: 130067-132 575 bp Feature: gene Location: 132871-133701 bp Ori: ACB69055.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 133048-133492 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 133048-133492 bp Feature: gene Location: 133876-134832 bp Ori: ACB69056.1 Feature: domain Description: FimA Location: 134344-134830 bp Feature: domain Description: FimA Location: 134344-134830 bp Feature: gene Location: 135703-136860 bp Ori: ACB69057.1 Feature: domain Description: Tra8 Location: 135877-136849 bp Feature: domain Description: Tra8 Location: 135877-136849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09926 (fimbrial chaperone), FimD (COG3188), RVT-UG4, FimA (pfam16970), Tra8 (COG2826)