myRT

myRT report for GCA_000020265.1_ASM2026v1

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Seq: CP001076.1 Rhizobium etli CIAT 652 plasmid pB, complete sequence (429111 bp)
Overview 1 RT 1: 122886-129742 bp Neighborhood of RT #1 [122886, 129828] AraH gabD RVT-GII Tar PRK15048 Feature: gene Location: 122886-123905 bp Ori: ACE93828.1 Gene: rbsCb2 Feature: domain Description: AraH Location: 122964-123885 bp Feature: domain Description: AraH Location: 1 22964-1 23885 bp Feature: gene Location: 123929-125416 bp Ori: ACE93829.1 Gene: gabDb Feature: domain Description: gabD Location: 123959-125402 bp Feature: domain Description: gabD Location: 1 23959-1 25402 bp Feature: gene Location: 125952-126215 bp Ori: ACE93830.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125973-126207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 25973-1 26207 bp Feature: gene Location: 126197-126736 bp Feature: gene Location: 127819-129828 bp Ori: ACE93832.1 Gene: mcpG Feature: domain Description: Tar Location: 128272-128788 bp Feature: domain Description: Tar Location: 1 28272-1 28788 bp Feature: domain Description: PRK15048 Location: 128815-129742 bp Feature: domain Description: PRK1 5048 Location: 1 2881 5-1 29742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraH (COG1172), gabD (PRK11241), RVT-GII, Tar (COG0840), PRK15048 (methyl-accepting chemotaxis protein II; Provisional)

Seq: CP001074.1 Rhizobium etli CIAT 652, complete genome (4513324 bp)
Overview 1 RT 1: 3310361-3316354 bp Neighborhood of RT #1 [3310361, 3316354] DUF4062 RVT-UG17 SLATT_5 Feature: gene Location: 3310361-3310882 bp Feature: gene Location: 3310884-3312047 bp Ori: ACE92247.1 Feature: domain Description: DUF4062 Location: 3311007-3311280 bp Feature: domain Description: DUF4062 Location: 3311007-33112 80 bp Feature: gene Location: 3312278-3313594 bp Ori: ACE92248.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3312506-3313088 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3312 506-3313088 bp Feature: gene Location: 3313594-3314178 bp Ori: ACE92249.1 Feature: domain Description: SLATT_5 Location: 3313621-3314155 bp Feature: domain Description: SLATT_5 Location: 331362 1-3314155 bp Feature: gene Location: 3314435-3316354 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4062 (pfam13271), RVT-UG17, SLATT_5 (pfam18160)