myRT

myRT report for GCA_000021045.1_ASM2104v1

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Seq: CP001157.1 Azotobacter vinelandii DJ, complete genome (5365318 bp)
Overview 1 RT 1: 1312248-1319293 bp 2 RT 2: 1854671-1861553 bp 3 RT 3: 2028051-2036161 bp 4 RT 4: 2455606-2461168 bp 5 RT 5: 2469944-2475169 bp 6 RT 6: 2828219-2833372 bp 7 RT 7: 4649704-4656897 bp 8 RT 8: 4677085-4683089 bp Neighborhood of RT #1 [1312248, 1319334] groES groEL RVT_N RVT-GII GIIM HNH PRK10839 HTH_32 Neighborhood of RT #2 [1854671, 1861553] pepN YgfH_subfam RVT-GII GIIM DUF3144 Neighborhood of RT #3 [2028051, 2036181] Peptidase_C39A DadA RVT-GII thrS Neighborhood of RT #4 [2455606, 2461326] HTH_32 IS5 RVT_N RVT-GII GIIM IS5 NTP_transf_5 Neighborhood of RT #5 [2469944, 2475237] LysR RVT-GII PRK11053 LysR Neighborhood of RT #6 [2828219, 2833372] CysI COG3749 RVT-GII PRK11778 Neighborhood of RT #7 [4649704, 4656902] DDE_3 sCache_2 RVT-GII GIIM PRK10218 PRK01269 Neighborhood of RT #8 [4677085, 4683091] PRK11649 AnmK RVT-GII GIIM PRK13623 argC Feature: gene Location: 1312248-1312541 bp Ori: ACO77573.1 Gene: groES Feature: domain Description: groES Location: 1312251-1312536 bp Feature: domain Description: groES Location: 1 31 2251 -1 31 2536 bp Feature: gene Location: 1312587-1314227 bp Ori: ACO77574.1 Gene: groEL Feature: domain Description: groEL Location: 1312593-1314213 bp Feature: domain Description: groEL Location: 1 31 2593-1 31 421 3 bp Feature: gene Location: 1315404-1316951 bp Ori: ACO77575.1 Feature: domain Description: RVT_N Location: 1315407-1315554 bp Feature: domain Description: RVT_N Location: 1 31 5407-1 31 5554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1315602-1316247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 5602-1 31 6247 bp Feature: domain Description: GIIM Note: maturase Location: 1316298-1316532 bp Feature: domain Description: GIIM Note: maturase Location: 1 31 6298-1 31 6532 bp Feature: domain Description: HNH Note: nucleases Location: 1316772-1316907 bp Feature: domain Description: HNH Note: nucleases Location: 1 31 6772-1 31 6907 bp Feature: gene Location: 1317174-1317866 bp Ori: ACO77576.1 Gene: rsuA Feature: domain Description: PRK10839 Location: 1317177-1317858 bp Feature: domain Description: PRK1 0839 Location: 1 31 71 77-1 31 7858 bp Feature: gene Location: 1318861-1319334 bp Ori: ACO77577.1 Feature: domain Description: HTH_32 Location: 1319062-1319293 bp Feature: domain Description: HTH_32 Location: 1 31 9062-1 31 9293 bp Feature: gene Location: 1854671-1857328 bp Ori: ACO78085.1 Gene: pepN Feature: domain Description: pepN Location: 1854674-1857326 bp Feature: domain Description: pepN Location: 1 854674-1 857326 bp Feature: gene Location: 1857507-1859003 bp Ori: ACO78086.1 Feature: domain Description: YgfH_subfam Location: 1857549-1858986 bp Feature: domain Description: YgfH_subfam Location: 1 857549-1 858986 bp Feature: gene Location: 1859466-1860833 bp Ori: ACO78087.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1859799-1860411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 859799-1 86041 1 bp Feature: domain Description: GIIM Note: maturase Location: 1860471-1860687 bp Feature: domain Description: GIIM Note: maturase Location: 1 860471 -1 860687 bp Feature: gene Location: 1860952-1861239 bp Ori: ACO78088.1 Feature: domain Description: DUF3144 Location: 1860961-1861186 bp Feature: domain Description: DUF31 44 Location: 1 860961 -1 861 1 86 bp Feature: gene Location: 1861233-1861553 bp Feature: gene Location: 2028051-2028569 bp Ori: ACO78241.1 Feature: domain Description: Peptidase_C39A Location: 2028117-2028525 bp Feature: domain Description: Peptidase_C39A Location: 20281 1 7-2028525 bp Feature: gene Location: 2028581-2029864 bp Ori: ACO78242.1 Feature: domain Description: DadA Location: 2028668-2029799 bp Feature: domain Description: DadA Location: 2028668-2029799 bp Feature: gene Location: 2030600-2031277 bp Ori: ACO78243.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2030957-2031275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2030957-2031 275 bp Feature: gene Location: 2032155-2032412 bp Feature: gene Location: 2034259-2036181 bp Ori: ACO78245.1 Gene: thrS Feature: domain Description: thrS Location: 2034265-2036161 bp Feature: domain Description: thrS Location: 2034265-20361 61 bp Feature: gene Location: 2455606-2456079 bp Ori: ACO78641.1 Feature: domain Description: HTH_32 Location: 2455807-2456038 bp Feature: domain Description: HTH_32 Location: 2455807-2456038 bp Feature: gene Location: 2456516-2457049 bp Ori: ACO78642.1 Feature: domain Description: IS5 Location: 2456705-2457038 bp Feature: domain Description: IS5 Location: 2456705-2457038 bp Feature: gene Location: 2457641-2459158 bp Ori: ACO78643.1 Feature: domain Description: RVT_N Location: 2457725-2457947 bp Feature: domain Description: RVT_N Location: 2457725-2457947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2458001-2458643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2458001 -2458643 bp Feature: domain Description: GIIM Note: maturase Location: 2458697-2458940 bp Feature: domain Description: GIIM Note: maturase Location: 2458697-2458940 bp Feature: gene Location: 2459544-2459687 bp Ori: ACO78644.1 Feature: domain Description: IS5 Location: 2459556-2459661 bp Feature: domain Description: IS5 Location: 2459556-2459661 bp Feature: gene Location: 2460208-2461326 bp Ori: ACO78645.1 Feature: domain Description: NTP_transf_5 Location: 2460454-2461168 bp Feature: domain Description: NTP_transf_5 Location: 2460454-2461 1 68 bp Feature: gene Location: 2469944-2470273 bp Feature: gene Location: 2470394-2471347 bp Ori: ACO78657.1 Feature: domain Description: LysR Location: 2470403-2471285 bp Feature: domain Description: LysR Location: 2470403-2471 285 bp Feature: gene Location: 2471463-2473238 bp Ori: ACO78658.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2472177-2472867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24721 77-2472867 bp Feature: gene Location: 2473484-2474137 bp Ori: ACO78659.1 Feature: domain Description: PRK11053 Location: 2473490-2474132 bp Feature: domain Description: PRK1 1 053 Location: 2473490-24741 32 bp Feature: gene Location: 2474278-2475237 bp Ori: ACO78660.1 Feature: domain Description: LysR Location: 2474287-2475169 bp Feature: domain Description: LysR Location: 2474287-24751 69 bp Feature: gene Location: 2828219-2829877 bp Ori: ACO78926.1 Gene: cysI Feature: domain Description: CysI Location: 2828222-2829857 bp Feature: domain Description: CysI Location: 2828222-2829857 bp Feature: gene Location: 2829861-2830358 bp Ori: ACO78927.1 Feature: domain Description: COG3749 Location: 2829864-2830353 bp Feature: domain Description: COG3749 Location: 2829864-2830353 bp Feature: gene Location: 2830799-2831659 bp Ori: ACO78928.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2830964-2831576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2830964-2831 576 bp Feature: gene Location: 2832233-2833261 bp Ori: ACO78929.1 Feature: domain Description: PRK11778 Location: 2832248-2833232 bp Feature: domain Description: PRK1 1 778 Location: 2832248-2833232 bp Feature: gene Location: 2833295-2833372 bp Feature: gene Location: 4649704-4650345 bp Ori: ACO80691.1 Feature: domain Description: DDE_3 Location: 4649839-4650259 bp Feature: domain Description: DDE_3 Location: 4649839-4650259 bp Feature: gene Location: 4650957-4651394 bp Ori: ACO80692.1 Feature: domain Description: sCache_2 Location: 4651032-4651383 bp Feature: domain Description: sCache_2 Location: 4651 032-4651 383 bp Feature: gene Location: 4651655-4653022 bp Ori: ACO80693.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4651988-4652600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4651 988-4652600 bp Feature: domain Description: GIIM Note: maturase Location: 4652660-4652876 bp Feature: domain Description: GIIM Note: maturase Location: 4652660-4652876 bp Feature: gene Location: 4653485-4655305 bp Ori: ACO80694.1 Gene: typA Feature: domain Description: PRK10218 Location: 4653488-4655297 bp Feature: domain Description: PRK1 021 8 Location: 4653488-4655297 bp Feature: gene Location: 4655448-4656902 bp Ori: ACO80695.1 Gene: thiI Feature: domain Description: PRK01269 Location: 4655451-4656897 bp Feature: domain Description: PRK01 269 Location: 4655451 -4656897 bp Feature: gene Location: 4677085-4678527 bp Ori: ACO80709.1 Feature: domain Description: PRK11649 Location: 4677433-4678486 bp Feature: domain Description: PRK1 1 649 Location: 4677433-4678486 bp Feature: gene Location: 4678555-4679649 bp Ori: ACO80710.1 Feature: domain Description: AnmK Location: 4678564-4679647 bp Feature: domain Description: AnmK Location: 4678564-4679647 bp Feature: gene Location: 4679755-4681122 bp Ori: ACO80711.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4680088-4680700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4680088-4680700 bp Feature: domain Description: GIIM Note: maturase Location: 4680760-4680976 bp Feature: domain Description: GIIM Note: maturase Location: 4680760-4680976 bp Feature: gene Location: 4681573-4681923 bp Ori: ACO80712.1 Gene: erpA Feature: domain Description: PRK13623 Location: 4681594-4681921 bp Feature: domain Description: PRK1 3623 Location: 4681 594-4681 921 bp Feature: gene Location: 4682057-4683091 bp Ori: ACO80713.1 Gene: argC Feature: domain Description: argC Location: 4682060-4683089 bp Feature: domain Description: argC Location: 4682060-4683089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PRK10839 (16S rRNA pseudouridine(516) synthase RsuA), HTH_32 (pfam13565), pepN (PRK14015), YgfH_subfam (TIGR03458)
DUF3144 (pfam11342), Peptidase_C39A (cd02549), DadA (COG0665), thrS (TIGR00418), IS5 (COG3039), NTP_transf_5 (pfam14907), LysR (COG0583), PRK11053 (oxygen-insensitive NAD(P)H nitroreductase), CysI (TIGR02041), COG3749 (Uncharacterized conserved protein, DUF934 family )
PRK11778 (putative inner membrane peptidase; Provisional), DDE_3 (pfam13358), sCache_2 (pfam17200), PRK10218 (translational GTPase TypA), PRK01269 (tRNA s(4)U8 sulfurtransferase; Provisional), PRK11649 (putative peptidase; Provisional), AnmK (pfam03702), PRK13623 (iron-sulfur cluster insertion protein ErpA; Provisional), argC (TIGR01850)