myRT

myRT report for GCA_000021905.1_ASM2190v1

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Seq: CP001322.1 Desulfatibacillum aliphaticivorans strain AK-01, complete genome (6517073 bp)
Overview 1 RT 1: 4723177-4732365 bp Neighborhood of RT #1 [4723177, 4732385] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-UG5 nitrilase COG5421 MdlB Feature: gene Location: 4723177-4723524 bp Ori: ACL05430.1 Feature: domain Description: TnpB_IS66 Location: 4723204-4723489 bp Feature: domain Description: TnpB_IS66 Location: 4723204-4723489 bp Feature: gene Location: 4723590-4725182 bp Ori: ACL05431.1 Feature: domain Description: LZ_Tnp_IS66 Location: 4723716-4723926 bp Feature: domain Description: LZ_Tnp_IS66 Location: 472371 6-4723926 bp Feature: domain Description: zf-IS66 Location: 4723950-4724079 bp Feature: domain Description: zf-IS66 Location: 4723950-4724079 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4724142-4725024 bp Feature: domain Description: DDE_Tnp_IS66 Location: 47241 42-4725024 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4725042-4725153 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4725042-47251 53 bp Feature: gene Location: 4725279-4728188 bp Ori: ACL05432.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4725753-4726260 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4725753-4726260 bp Feature: domain Description: nitrilase Location: 4727517-4728018 bp Feature: domain Description: nitrilase Location: 472751 7-472801 8 bp Feature: gene Location: 4728217-4730100 bp Ori: ACL05433.1 Feature: domain Description: COG5421 Location: 4728940-4729888 bp Feature: domain Description: COG5421 Location: 4728940-4729888 bp Feature: gene Location: 4730313-4732385 bp Ori: ACL05434.1 Feature: domain Description: MdlB Location: 4730352-4732365 bp Feature: domain Description: MdlB Location: 4730352-4732365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-UG5, nitrilase (cl11424), COG5421 (Transposase ), MdlB (COG1132)