myRT

myRT report for GCA_000023545.1_ASM2354v1

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Seq: CP001654.1 Dickeya paradisiaca Ech703 chromosome, complete genome (4679450 bp)
Overview 1 RT 1: 813412-820534 bp 2 RT 2: 2785264-2790345 bp 3 RT 3: 3990809-3993900 bp Neighborhood of RT #1 [813412, 820542] Flavin_Reduct RVT-GII Intron_maturas2 HNHc PRK09010 uvrA Neighborhood of RT #2 [2785264, 2790345] ABC_ATPase RVT-Retrons Neighborhood of RT #3 [3990809, 3993900] PRK13710 PRK13708 RVT-Retrons Feature: gene Location: 813412-813999 bp Ori: ACS84531.1 Feature: domain Description: Flavin_Reduct Location: 813466-813877 bp Feature: domain Description: Flavin_Reduct Location: 81 3466-81 3877 bp Feature: gene Location: 814078-814371 bp Feature: gene Location: 814388-816268 bp Ori: ACS84533.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 814676-815513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 4676-81 551 3 bp Feature: domain Description: Intron_maturas2 Location: 815621-815903 bp Feature: domain Description: Intron_maturas2 Location: 81 5621 -81 5903 bp Feature: domain Description: HNHc Note: nucleases Location: 816044-816221 bp Feature: domain Description: HNHc Note: nucleases Location: 81 6044-81 6221 bp Feature: gene Location: 816882-817424 bp Ori: ACS84534.1 Feature: domain Description: PRK09010 Location: 816885-817422 bp Feature: domain Description: PRK0901 0 Location: 81 6885-81 7422 bp Feature: gene Location: 817711-820542 bp Ori: ACS84535.1 Feature: domain Description: uvrA Location: 817714-820534 bp Feature: domain Description: uvrA Location: 81 771 4-820534 bp Feature: gene Location: 2785264-2785593 bp Feature: gene Location: 2786111-2787475 bp Ori: ACS86153.1 Feature: domain Description: ABC_ATPase Location: 2786162-2786867 bp Feature: domain Description: ABC_ATPase Location: 27861 62-2786867 bp Feature: gene Location: 2787472-2788422 bp Ori: ACS86154.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2787619-2788147 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 278761 9-27881 47 bp Feature: gene Location: 2789180-2789788 bp Feature: gene Location: 2789857-2790345 bp Feature: gene Location: 3990809-3991027 bp Ori: ACS87178.1 Feature: domain Description: PRK13710 Location: 3990812-3991025 bp Feature: domain Description: PRK1 371 0 Location: 399081 2-3991 025 bp Feature: gene Location: 3991030-3991335 bp Ori: ACS87179.1 Feature: domain Description: PRK13708 Location: 3991033-3991333 bp Feature: domain Description: PRK1 3708 Location: 3991 033-3991 333 bp Feature: gene Location: 3991477-3992475 bp Ori: ACS87180.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3991714-3992278 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3991 71 4-3992278 bp Feature: gene Location: 3992646-3993383 bp Feature: gene Location: 3993373-3993900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Flavin_Reduct (smart00903), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK09010 (single-stranded DNA-binding protein; Provisional), uvrA (PRK00349), ABC_ATPase (pfam09818), RVT-Retrons, PRK13710 (type II toxin-antitoxin system antitoxin CcdA), PRK13708 (type II toxin-antitoxin system toxin CcdB)