myRT

myRT report for GCA_000024005.1_ASM2400v1

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Seq: CP001699.1 Chitinophaga pinensis DSM 2588, complete genome (9127347 bp)
Overview 1 RT 1: 5091856-5100534 bp 2 RT 2: 5261630-5267330 bp Neighborhood of RT #1 [5091856, 5100545] WGR_DNA_ligase HEAT_2 SWIM RVT-Retrons CypX Neighborhood of RT #2 [5261630, 5267330] HTH_Tnp_1 Tra5 group_II_RT_mat RVT-UG6 Feature: gene Location: 5091856-5095074 bp Ori: ACU61554.1 Feature: domain Description: WGR_DNA_ligase Location: 5091871-5092096 bp Feature: domain Description: WGR_DNA_ligase Location: 5091 871 -5092096 bp Feature: domain Description: HEAT_2 Location: 5092234-5092441 bp Feature: domain Description: HEAT_2 Location: 5092234-5092441 bp Feature: gene Location: 5095085-5096743 bp Ori: ACU61555.1 Feature: domain Description: SWIM Location: 5096609-5096702 bp Feature: domain Description: SWIM Location: 5096609-5096702 bp Feature: gene Location: 5097192-5098703 bp Ori: ACU61556.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5097735-5098353 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5097735-5098353 bp Feature: gene Location: 5098800-5099129 bp Feature: gene Location: 5099382-5100545 bp Ori: ACU61558.1 Feature: domain Description: CypX Location: 5099409-5100534 bp Feature: domain Description: CypX Location: 5099409-51 00534 bp Feature: gene Location: 5261630-5261890 bp Ori: ACU61668.1 Feature: domain Description: HTH_Tnp_1 Location: 5261636-5261843 bp Feature: domain Description: HTH_Tnp_1 Location: 5261 636-5261 843 bp Feature: gene Location: 5261890-5262741 bp Ori: ACU61668.1 Feature: domain Description: Tra5 Location: 5262046-5262703 bp Feature: domain Description: Tra5 Location: 5262046-5262703 bp Feature: gene Location: 5262939-5266187 bp Ori: ACU61669.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 5263038-5263305 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5263038-5263305 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 5263590-5264046 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 5263590-5264046 bp Feature: gene Location: 5266184-5267086 bp Feature: gene Location: 5267235-5267330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), HEAT_2 (pfam13646), SWIM (pfam04434), RVT-Retrons, CypX (COG2124), HTH_Tnp_1 (pfam01527), Tra5 (COG2801), group_II_RT_mat (TIGR04416), RVT-UG6