myRT

myRT report for GCA_000024205.1_ASM2420v1

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Seq: CP001720.1 (4545624 bp)
Overview 1 RT 1: 1702713-1710953 bp 2 RT 2: 1926403-1931030 bp 3 RT 3: 4198554-4203648 bp 4 RT 4: 4211481-4216824 bp 5 RT 5: 4422160-4425882 bp Neighborhood of RT #1 [1702713, 1711183] tspaseT_teng_N InsQ tspaseT_teng_C COG2452 RVT-GII RVT-GII GIIM COG5421 asn_synth_AEB Neighborhood of RT #2 [1926403, 1931030] group_II_RT_mat RVT-GII GIIM COG5421 Neighborhood of RT #3 [4198554, 4203665] RVT-GII GIIM RVT-GII GIIM RVT-GII HTH_XRE Neighborhood of RT #4 [4211481, 4216997] NT_KNTase_like RVT-GII GIIM RVT-GII COG5421 Neighborhood of RT #5 [4422160, 4425971] FGE-sulfatase Avd_like RVT-DGRs RMtype1_S_Sau13435ORF2165P-TRD1-CR1_like Methylase_S Feature: gene Location: 1702713-1704101 bp Feature: domain Description: tspaseT_teng_N Location: 1702722-1702878 bp Feature: domain Description: tspaseT_teng_N Location: 1 702722-1 702878 bp Feature: domain Description: InsQ Location: 1703280-1703505 bp Feature: domain Description: InsQ Location: 1 703280-1 703505 bp Feature: domain Description: tspaseT_teng_C Location: 1703577-1703811 bp Feature: domain Description: tspaseT_teng_C Location: 1 703577-1 70381 1 bp Feature: gene Location: 1704127-1704561 bp Feature: domain Description: COG2452 Location: 1704151-1704511 bp Feature: domain Description: COG2452 Location: 1 7041 51 -1 70451 1 bp Feature: gene Location: 1705295-1705948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1705550-1705937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 705550-1 705937 bp Feature: gene Location: 1706249-1706938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1706252-1706555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 706252-1 706555 bp Feature: domain Description: GIIM Note: maturase Location: 1706636-1706843 bp Feature: domain Description: GIIM Note: maturase Location: 1 706636-1 706843 bp Feature: gene Location: 1707261-1709150 bp Feature: domain Description: COG5421 Location: 1707918-1708989 bp Feature: domain Description: COG5421 Location: 1 70791 8-1 708989 bp Feature: gene Location: 1709336-1711183 bp Feature: domain Description: asn_synth_AEB Location: 1709348-1710953 bp Feature: domain Description: asn_synth_AEB Location: 1 709348-1 71 0953 bp Feature: gene Location: 1926403-1926792 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1926520-1926691 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 926520-1 926691 bp Feature: gene Location: 1926830-1927444 bp Feature: gene Location: 1927629-1928951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1927932-1928571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 927932-1 928571 bp Feature: domain Description: GIIM Note: maturase Location: 1928643-1928862 bp Feature: domain Description: GIIM Note: maturase Location: 1 928643-1 928862 bp Feature: gene Location: 1929865-1930647 bp Feature: domain Description: COG5421 Location: 1929934-1930480 bp Feature: domain Description: COG5421 Location: 1 929934-1 930480 bp Feature: gene Location: 1930773-1931030 bp Feature: gene Location: 4198554-4198700 bp Feature: gene Location: 4199142-4199315 bp Feature: gene Location: 4199333-4199905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4199405-4199525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 99405-41 99525 bp Feature: domain Description: GIIM Note: maturase Location: 4199597-4199816 bp Feature: domain Description: GIIM Note: maturase Location: 41 99597-41 9981 6 bp Feature: gene Location: 4199955-4201202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4200159-4200816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42001 59-420081 6 bp Feature: domain Description: GIIM Note: maturase Location: 4200897-4201128 bp Feature: domain Description: GIIM Note: maturase Location: 4200897-4201 1 28 bp Feature: gene Location: 4201711-4202517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4202014-4202491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 420201 4-4202491 bp Feature: gene Location: 4202702-4203088 bp Feature: gene Location: 4203381-4203665 bp Feature: domain Description: HTH_XRE Location: 4203492-4203648 bp Feature: domain Description: HTH_XRE Location: 4203492-4203648 bp Feature: gene Location: 4211481-4211735 bp Feature: domain Description: NT_KNTase_like Location: 4211487-4211667 bp Feature: domain Description: NT_KNTase_like Location: 421 1 487-421 1 667 bp Feature: gene Location: 4212416-4212706 bp Feature: gene Location: 4212961-4213506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4212991-4213126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421 2991 -421 31 26 bp Feature: domain Description: GIIM Note: maturase Location: 4213204-4213426 bp Feature: domain Description: GIIM Note: maturase Location: 421 3204-421 3426 bp Feature: gene Location: 4213887-4214633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4214193-4214583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421 41 93-421 4583 bp Feature: gene Location: 4214826-4215161 bp Feature: gene Location: 4215285-4216997 bp Feature: domain Description: COG5421 Location: 4215459-4216824 bp Feature: domain Description: COG5421 Location: 421 5459-421 6824 bp Feature: gene Location: 4422160-4423152 bp Feature: domain Description: FGE-sulfatase Location: 4422469-4422724 bp Feature: domain Description: FGE-sulfatase Location: 4422469-4422724 bp Feature: gene Location: 4423221-4423562 bp Feature: domain Description: Avd_like Location: 4423239-4423551 bp Feature: domain Description: Avd_like Location: 4423239-4423551 bp Feature: gene Location: 4423880-4424989 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4424087-4424801 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4424087-4424801 bp Feature: gene Location: 4424986-4425144 bp Feature: gene Location: 4425225-4425971 bp Feature: domain Description: RMtype1_S_Sau13435ORF2165P-TRD1-CR1_like Location: 4425315-4425738 bp Feature: domain Description: RMtype1 _S_Sau1 3435ORF21 65P-TRD1 -CR1 _like Location: 442531 5-4425738 bp Feature: domain Description: Methylase_S Location: 4425771-4425882 bp Feature: domain Description: Methylase_S Location: 4425771 -4425882 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tspaseT_teng_N (TIGR01765), InsQ (COG0675), tspaseT_teng_C (TIGR01766), COG2452 (Predicted site-specific integrase-resolvase ), RVT-GII, GIIM (pfam08388), COG5421 (Transposase ), asn_synth_AEB (TIGR01536), group_II_RT_mat (TIGR04416), HTH_XRE (smart00530)
NT_KNTase_like (cd05403), FGE-sulfatase (pfam03781), Avd_like (cd16376), RVT-DGRs, RMtype1_S_Sau13435ORF2165P-TRD1-CR1_like (cd17258), Methylase_S (pfam01420)