myRT

myRT report for GCA_000024365.1_ASM2436v1

Download annotations/find similar RTs

Seq: CP001737.1 Nakamurella multipartita DSM 44233 chromosome, complete genome (6060298 bp)
Overview 1 RT 1: 1354085-1359895 bp 2 RT 2: 3411972-3420123 bp Neighborhood of RT #1 [1354085, 1359933] CRISPR_Cas6 RVT-CRISPR Transposase_mut RVT-CRISPR Cas_Cas1 PHA02517 xerC Neighborhood of RT #2 [3411972, 3420125] PRK14705 YpfJ RVT-Retrons RhtB YbbN Feature: gene Location: 1354085-1354459 bp Feature: gene Location: 1354443-1355168 bp Ori: ACV77637.1 Feature: domain Description: CRISPR_Cas6 Location: 1354779-1355118 bp Feature: domain Description: CRISPR_Cas6 Location: 1 354779-1 3551 1 8 bp Feature: gene Location: 1355212-1355586 bp Ori: ACV77638.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1355392-1355572 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 355392-1 355572 bp Feature: gene Location: 1355630-1356877 bp Ori: ACV77639.1 Feature: domain Description: Transposase_mut Location: 1355681-1356767 bp Feature: domain Description: Transposase_mut Location: 1 355681 -1 356767 bp Feature: gene Location: 1356930-1357865 bp Ori: ACV77640.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1357023-1357449 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 357023-1 357449 bp Feature: domain Description: Cas_Cas1 Location: 1357524-1357815 bp Feature: domain Description: Cas_Cas1 Location: 1 357524-1 35781 5 bp Feature: gene Location: 1357855-1358730 bp Ori: ACV77641.1 Feature: domain Description: PHA02517 Location: 1357879-1358716 bp Feature: domain Description: PHA0251 7 Location: 1 357879-1 35871 6 bp Feature: gene Location: 1358929-1359933 bp Ori: ACV77642.1 Feature: domain Description: xerC Location: 1359028-1359895 bp Feature: domain Description: xerC Location: 1 359028-1 359895 bp Feature: gene Location: 3411972-3414236 bp Ori: ACV79427.1 Feature: domain Description: PRK14705 Location: 3412083-3414222 bp Feature: domain Description: PRK1 4705 Location: 341 2083-341 4222 bp Feature: gene Location: 3414233-3415528 bp Ori: ACV79428.1 Feature: domain Description: YpfJ Location: 3414278-3415073 bp Feature: domain Description: YpfJ Location: 341 4278-341 5073 bp Feature: gene Location: 3415759-3417081 bp Ori: ACV79429.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3416212-3416848 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 341 621 2-341 6848 bp Feature: gene Location: 3418423-3419043 bp Ori: ACV79430.1 Feature: domain Description: RhtB Location: 3418438-3419023 bp Feature: domain Description: RhtB Location: 341 8438-341 9023 bp Feature: gene Location: 3419124-3420125 bp Ori: ACV79431.1 Feature: domain Description: YbbN Location: 3419289-3420123 bp Feature: domain Description: YbbN Location: 341 9289-34201 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas6 (pfam10040), RVT-CRISPR, Transposase_mut (pfam00872), Cas_Cas1 (pfam01867), PHA02517 (putative transposase OrfB; Reviewed), xerC (PRK01287), PRK14705 (glycogen branching enzyme; Provisional), YpfJ (COG2321), RVT-Retrons, RhtB (COG1280)
YbbN (COG3118)