myRT

myRT report for GCA_000024525.1_ASM2452v1

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Seq: CP001772.1 Spirosoma linguale DSM 74 plasmid pSLIN03, complete sequence (36434 bp)
Overview 1 RT 1: 9547-15945 bp Neighborhood of RT #1 [9547, 16862] TIR-like InsE RVT_N RVT-GII GIIM PHA02517 LRR_RI LRR_8 RocCOR COR Feature: gene Location: 9547-10002 bp Ori: ADB42928.1 Feature: domain Description: TIR-like Location: 9559-9922 bp Feature: domain Description: TIR-like Location: 9559-9922 bp Feature: gene Location: 10209-10505 bp Ori: ADB42929.1 Feature: domain Description: InsE Location: 10212-10488 bp Feature: domain Description: InsE Location: 1 021 2-1 0488 bp Feature: gene Location: 11499-13022 bp Ori: ADB42930.1 Feature: domain Description: RVT_N Location: 11535-11721 bp Feature: domain Description: RVT_N Location: 1 1 535-1 1 721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11805-12567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 805-1 2567 bp Feature: domain Description: GIIM Note: maturase Location: 12642-12867 bp Feature: domain Description: GIIM Note: maturase Location: 1 2642-1 2867 bp Feature: gene Location: 13015-13545 bp Ori: ADB42931.1 Feature: domain Description: PHA02517 Location: 13096-13531 bp Feature: domain Description: PHA0251 7 Location: 1 3096-1 3531 bp Feature: gene Location: 14085-16862 bp Ori: ADB42932.1 Feature: domain Description: LRR_RI Location: 14106-14514 bp Feature: domain Description: LRR_RI Location: 1 41 06-1 451 4 bp Feature: domain Description: LRR_8 Location: 14619-14790 bp Feature: domain Description: LRR_8 Location: 1 461 9-1 4790 bp Feature: domain Description: RocCOR Location: 14880-15345 bp Feature: domain Description: RocCOR Location: 1 4880-1 5345 bp Feature: domain Description: COR Location: 15387-15945 bp Feature: domain Description: COR Location: 1 5387-1 5945 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIR-like (pfam10137), InsE (COG2963), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), LRR_RI (smart00368), LRR_8 (pfam13855), RocCOR (cd09914), COR (pfam16095)

Seq: CP001769.1 Spirosoma linguale DSM 74, complete genome (8078757 bp)
Overview 1 RT 1: 787132-791755 bp Neighborhood of RT #1 [787132, 791775] SLATT_5 RVT-UG17 CaiD PAP2_like Feature: gene Location: 787132-787284 bp Feature: gene Location: 787495-788106 bp Ori: ADB36690.1 Feature: domain Description: SLATT_5 Location: 787498-788080 bp Feature: domain Description: SLATT_5 Location: 787498-788080 bp Feature: gene Location: 788249-789634 bp Ori: ADB36691.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 788483-789068 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 788483-789068 bp Feature: gene Location: 790261-791058 bp Ori: ADB36692.1 Feature: domain Description: CaiD Location: 790264-791047 bp Feature: domain Description: CaiD Location: 7902 64-791047 bp Feature: gene Location: 791161-791775 bp Ori: ADB36693.1 Feature: domain Description: PAP2_like Location: 791494-791755 bp Feature: domain Description: PAP2 _like Location: 791494-791755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, CaiD (COG1024), PAP2_like (cl00474)