myRT

myRT report for GCA_000024705.1_ASM2470v1

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Seq: CP001794.1 Geobacillus sp. Y412MC61, complete genome (3622844 bp)
Overview 1 RT 1: 1226431-1230585 bp 2 RT 2: 1447351-1451345 bp 3 RT 3: 2093513-2103495 bp 4 RT 4: 3208687-3216511 bp Neighborhood of RT #1 [1226431, 1230683] DmpA RVT-GII GIIM MFS_MdtG_MDR_like Neighborhood of RT #2 [1447351, 1451345] TlyC RVT-GII GIIM SASP Neighborhood of RT #3 [2093513, 2103506] PRK00549 recA RVT-GII HNHc recA RVT-GII GIIM RNase_Y YmdB Neighborhood of RT #4 [3208687, 3216537] RVT-GII GIIM VanZ HTH_Tnp_ISL3 DDE_Tnp_ISL3 Feature: gene Location: 1226431-1227474 bp Ori: ACX77853.1 Feature: domain Description: DmpA Location: 1226467-1227436 bp Feature: domain Description: DmpA Location: 1 226467-1 227436 bp Feature: gene Location: 1227557-1228819 bp Ori: ACX77854.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1227758-1228376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 227758-1 228376 bp Feature: domain Description: GIIM Note: maturase Location: 1228424-1228640 bp Feature: domain Description: GIIM Note: maturase Location: 1 228424-1 228640 bp Feature: gene Location: 1229015-1229143 bp Feature: gene Location: 1229451-1230683 bp Ori: ACX77856.1 Feature: domain Description: MFS_MdtG_MDR_like Location: 1229481-1230585 bp Feature: domain Description: MFS_MdtG_MDR_like Location: 1 229481 -1 230585 bp Feature: gene Location: 1447351-1448622 bp Ori: ACX78060.1 Feature: domain Description: TlyC Location: 1447390-1448596 bp Feature: domain Description: TlyC Location: 1 447390-1 448596 bp Feature: gene Location: 1448914-1449042 bp Feature: gene Location: 1449238-1450500 bp Ori: ACX78062.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1449439-1450057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 449439-1 450057 bp Feature: domain Description: GIIM Note: maturase Location: 1450105-1450321 bp Feature: domain Description: GIIM Note: maturase Location: 1 4501 05-1 450321 bp Feature: gene Location: 1450601-1450813 bp Ori: ACX78063.1 Feature: domain Description: SASP Location: 1450625-1450787 bp Feature: domain Description: SASP Location: 1 450625-1 450787 bp Feature: gene Location: 1451103-1451345 bp Feature: gene Location: 2093513-2094757 bp Ori: ACX78696.1 Feature: domain Description: PRK00549 Location: 2093519-2094746 bp Feature: domain Description: PRK00549 Location: 209351 9-2094746 bp Feature: gene Location: 2094936-2095334 bp Ori: ACX78697.1 Feature: domain Description: recA Location: 2094942-2095308 bp Feature: domain Description: recA Location: 2094942-2095308 bp Feature: gene Location: 2096018-2097925 bp Ori: ACX78698.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2096360-2097062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2096360-2097062 bp Feature: domain Description: HNHc Note: nucleases Location: 2097680-2097848 bp Feature: domain Description: HNHc Note: nucleases Location: 2097680-2097848 bp Feature: gene Location: 2097953-2098786 bp Ori: ACX78699.1 Feature: domain Description: recA Location: 2098115-2098745 bp Feature: domain Description: recA Location: 20981 1 5-2098745 bp Feature: gene Location: 2099064-2099192 bp Feature: gene Location: 2099388-2100650 bp Ori: ACX78701.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2099589-2100207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2099589-21 00207 bp Feature: domain Description: GIIM Note: maturase Location: 2100255-2100471 bp Feature: domain Description: GIIM Note: maturase Location: 21 00255-21 00471 bp Feature: gene Location: 2101054-2102610 bp Ori: ACX78702.1 Feature: domain Description: RNase_Y Location: 2101072-2102608 bp Feature: domain Description: RNase_Y Location: 21 01 072-21 02608 bp Feature: gene Location: 2102712-2103506 bp Ori: ACX78703.1 Feature: domain Description: YmdB Location: 2102715-2103495 bp Feature: domain Description: YmdB Location: 21 0271 5-21 03495 bp Feature: gene Location: 3208687-3209253 bp Feature: gene Location: 3209265-3209558 bp Feature: gene Location: 3211428-3212690 bp Ori: ACX79719.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3211629-3212247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321 1 629-321 2247 bp Feature: domain Description: GIIM Note: maturase Location: 3212295-3212511 bp Feature: domain Description: GIIM Note: maturase Location: 321 2295-321 251 1 bp Feature: gene Location: 3213695-3214285 bp Ori: ACX79720.1 Feature: domain Description: VanZ Location: 3213725-3214250 bp Feature: domain Description: VanZ Location: 321 3725-321 4250 bp Feature: gene Location: 3215365-3216537 bp Ori: ACX79721.1 Feature: domain Description: HTH_Tnp_ISL3 Location: 3215635-3215776 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 321 5635-321 5776 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3215818-3216511 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 321 581 8-321 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Associated domains:myRT DmpA (COG3191), RVT-GII, GIIM (pfam08388), MFS_MdtG_MDR_like (cd17391), TlyC (COG1253), SASP (pfam00269), PRK00549 (competence damage-inducible protein A; Provisional), recA (PRK09519), HNHc (smart00507), RNase_Y (TIGR03319)
YmdB (pfam13277), VanZ (pfam04892), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610)