myRT

myRT report for GCA_000024725.1_ASM2472v1

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Seq: CP001798.1 Nitrosococcus halophilus Nc4, complete genome (4079427 bp)
Overview 1 RT 1: 1153294-1154521 bp 2 RT 2: 1958907-1962036 bp Neighborhood of RT #1 [1153294, 1154733] HTH_XRE RVT-Retrons Neighborhood of RT #2 [1958907, 1962036] RAYT RVT-GII IS285 Feature: gene Location: 1153294-1153497 bp Feature: gene Location: 1153549-1153854 bp Ori: ADE14329.1 Feature: domain Description: HTH_XRE Location: 1153561-1153723 bp Feature: domain Description: HTH_XRE Location: 1 1 53561 -1 1 53723 bp Feature: gene Location: 1153927-1154733 bp Ori: ADE14330.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1154005-1154521 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 54005-1 1 54521 bp Feature: gene Location: 1958907-1959338 bp Ori: ADE15010.1 Feature: domain Description: RAYT Location: 1958916-1959309 bp Feature: domain Description: RAYT Location: 1 95891 6-1 959309 bp Feature: gene Location: 1959401-1959757 bp Feature: gene Location: 1959812-1960303 bp Ori: ADE15012.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1960145-1960280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9601 45-1 960280 bp Feature: gene Location: 1960341-1961564 bp Ori: ADE15013.1 Feature: domain Description: IS285 Location: 1960392-1961559 bp Feature: domain Description: IS285 Location: 1 960392-1 961 559 bp Feature: gene Location: 1961572-1962036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, RAYT (COG1943), RVT-GII, IS285 (COG3328)