myRT

myRT report for GCA_000025965.1_ASM2596v1

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Seq: CR555306.1 Azoarcus aromaticum EbN1 complete genome (4296230 bp)
Overview 1 RT 1: 292005-298780 bp 2 RT 2: 2544441-2549344 bp 3 RT 3: 2930140-2935863 bp 4 RT 4: 4247379-4251430 bp Neighborhood of RT #1 [292005, 298780] AcrR HTH_XRE RVT-Retrons Trypsin_2 Neighborhood of RT #2 [2544441, 2549344] Glyco_tranf_GTA_type DDE_Tnp_1_assoc YhhI YhhI RVT-GII group_II_RT_mat YhhI Neighborhood of RT #3 [2930140, 2935868] PHA02517 InsE RVT-GII RVT-GII GIIM COG2905 Neighborhood of RT #4 [4247379, 4251430] Sulfotransfer_3 YhhI RVT-GII group_II_RT_mat DDE_Tnp_1_assoc YhhI YhhI Feature: gene Location: 292005-292622 bp Ori: CAI06380.1 Feature: domain Description: AcrR Location: 292041-292602 bp Feature: domain Description: AcrR Location: 292041 -292602 bp Feature: gene Location: 293017-293805 bp Ori: CAI06381.1 Feature: domain Description: HTH_XRE Location: 293179-293326 bp Feature: domain Description: HTH_XRE Location: 2931 79-293326 bp Feature: gene Location: 293975-295894 bp Ori: CAI06382.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 294122-294737 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2941 22-294737 bp Feature: domain Description: Trypsin_2 Location: 295205-295673 bp Feature: domain Description: Trypsin_2 Location: 295205-295673 bp Feature: gene Location: 296233-297759 bp Feature: gene Location: 297737-298780 bp Feature: gene Location: 2544441-2545385 bp Ori: CAI08561.1 Feature: domain Description: Glyco_tranf_GTA_type Location: 2544468-2545038 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 2544468-2545038 bp Feature: gene Location: 2545520-2546995 bp Ori: CAI08562.1 Gene: tnpF13 Feature: domain Description: DDE_Tnp_1_assoc Location: 2545553-2545811 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 2545553-254581 1 bp Feature: domain Description: YhhI Location: 2545952-2546147 bp Feature: domain Description: YhhI Location: 2545952-25461 47 bp Feature: domain Description: YhhI Location: 2546339-2546477 bp Feature: domain Description: YhhI Location: 2546339-2546477 bp Feature: gene Location: 2546992-2547891 bp Ori: CAI08563.1 Gene: revt3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2547199-2547586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25471 99-2547586 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2547586-2547775 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2547586-2547775 bp Feature: gene Location: 2547902-2548180 bp Ori: CAI08564.1 Gene: tnpF14 Feature: domain Description: YhhI Location: 2547965-2548109 bp Feature: domain Description: YhhI Location: 2547965-25481 09 bp Feature: gene Location: 2548271-2549344 bp Feature: gene Location: 2930140-2930973 bp Ori: CAI08932.1 Gene: istA Feature: domain Description: PHA02517 Location: 2930227-2930932 bp Feature: domain Description: PHA0251 7 Location: 2930227-2930932 bp Feature: gene Location: 2930970-2931275 bp Ori: CAI08933.1 Gene: istB Feature: domain Description: InsE Location: 2930973-2931246 bp Feature: domain Description: InsE Location: 2930973-2931 246 bp Feature: gene Location: 2931643-2932392 bp Ori: CAI08934.1 Gene: revT1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2931850-2932384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2931 850-2932384 bp Feature: gene Location: 2932385-2933014 bp Ori: CAI08935.1 Gene: revT1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2932391-2932625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2932391 -2932625 bp Feature: domain Description: GIIM Note: maturase Location: 2932709-2932925 bp Feature: domain Description: GIIM Note: maturase Location: 2932709-2932925 bp Feature: gene Location: 2933053-2933739 bp Feature: gene Location: 2933970-2935868 bp Ori: CAI08937.1 Feature: domain Description: COG2905 Location: 2934012-2935863 bp Feature: domain Description: COG2905 Location: 293401 2-2935863 bp Feature: gene Location: 4247379-4247912 bp Ori: CAI10207.1 Feature: domain Description: Sulfotransfer_3 Location: 4247418-4247766 bp Feature: domain Description: Sulfotransfer_3 Location: 424741 8-4247766 bp Feature: gene Location: 4248050-4248355 bp Ori: CAI10208.1 Gene: tnpF Feature: domain Description: YhhI Location: 4248113-4248254 bp Feature: domain Description: YhhI Location: 42481 1 3-4248254 bp Feature: gene Location: 4248366-4249265 bp Ori: CAI10209.1 Gene: revT2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4248573-4248960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4248573-4248960 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4248960-4249149 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4248960-42491 49 bp Feature: gene Location: 4249262-4250737 bp Ori: CAI10210.1 Gene: tnp52 Feature: domain Description: DDE_Tnp_1_assoc Location: 4249295-4249553 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 4249295-4249553 bp Feature: domain Description: YhhI Location: 4249694-4249889 bp Feature: domain Description: YhhI Location: 4249694-4249889 bp Feature: domain Description: YhhI Location: 4250081-4250219 bp Feature: domain Description: YhhI Location: 4250081 -425021 9 bp Feature: gene Location: 4250840-4251430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), HTH_XRE (smart00530), RVT-Retrons, Trypsin_2 (pfam13365), Glyco_tranf_GTA_type (cl11394), DDE_Tnp_1_assoc (pfam13808), YhhI (COG5433), RVT-GII, group_II_RT_mat (TIGR04416), PHA02517 (putative transposase OrfB; Reviewed)
InsE (COG2963), GIIM (pfam08388), COG2905 (Signal-transduction protein containing cAMP-binding, CBS, and nucleotidyltransferase domains ), Sulfotransfer_3 (pfam13469)