myRT

myRT report for GCA_000026085.1_ASM2608v1

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Seq: CR954246.1 Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence (3214944 bp)
Overview 1 RT 1: 430606-435463 bp Neighborhood of RT #1 [430606, 435537] COG4584 COG4584 COG4584 RVT-GII RVT-GII PRK13389 Arm-DNA-bind_2 Phage_int_SAM_3 INT_ICEBs1_C_like Feature: gene Location: 430606-431715 bp Ori: CAI85514.1 Feature: domain Description: COG4584 Location: 430612-431089 bp Feature: domain Description: COG4584 Location: 43061 2-431 089 bp Feature: domain Description: COG4584 Location: 431188-431578 bp Feature: domain Description: COG4584 Location: 431 1 88-431 578 bp Feature: gene Location: 431735-432151 bp Ori: CAI85515.1 Feature: domain Description: COG4584 Location: 431981-432146 bp Feature: domain Description: COG4584 Location: 431 981 -4321 46 bp Feature: gene Location: 432912-433061 bp Ori: CAI85516.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432921-433059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432921 -433059 bp Feature: gene Location: 433092-433991 bp Ori: CAI85517.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433104-433614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4331 04-43361 4 bp Feature: gene Location: 434045-434185 bp Ori: CAI85518.1 Feature: domain Description: PRK13389 Location: 434063-434150 bp Feature: domain Description: PRK1 3389 Location: 434063-4341 50 bp Feature: gene Location: 434383-435537 bp Ori: CAI85519.1 Feature: domain Description: Arm-DNA-bind_2 Location: 434386-434578 bp Feature: domain Description: Arm-DNA-bind_2 Location: 434386-434578 bp Feature: domain Description: Phage_int_SAM_3 Location: 434641-434806 bp Feature: domain Description: Phage_int_SAM_3 Location: 434641 -434806 bp Feature: domain Description: INT_ICEBs1_C_like Location: 434983-435463 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 434983-435463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), RVT-GII, PRK13389 (UTP--glucose-1-phosphate uridylyltransferase GalU), Arm-DNA-bind_2 (pfam12167), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189)