myRT

myRT report for GCA_000026125.1_ASM2612v1

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Seq: CU207211.1 Herminiimonas arsenicoxydans chromosome, complete sequence (3424307 bp)
Overview 1 RT 1: 3259-8975 bp 2 RT 2: 1000805-1007580 bp Neighborhood of RT #1 [3259, 8986] gyrB RVT-Retrons COG3440 Neighborhood of RT #2 [1000805, 1007597] mogA PRK05255 RVT_N RVT-GII YkfC HNH PRK11040 TAT_signal_seq PBP2_TRAP_alpha-ketoacid Feature: gene Location: 3259-3426 bp Feature: gene Location: 3454-5961 bp Ori: CU207211.1_3454_5961_+ Gene: gyrB Feature: domain Description: gyrB Location: 3505-5959 bp Feature: domain Description: gyrB Location: 3505-5959 bp Feature: gene Location: 6021-7040 bp Ori: CU207211.1_6021_7040_- Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6174-6732 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61 74-6732 bp Feature: gene Location: 7189-8091 bp Feature: gene Location: 8189-8986 bp Ori: CU207211.1_8189_8986_- Feature: domain Description: COG3440 Location: 8519-8975 bp Feature: domain Description: COG3440 Location: 851 9-8975 bp Feature: gene Location: 1000805-1001425 bp Ori: CU207211.1_1000805_1001425_- Gene: mog Feature: domain Description: mogA Location: 1000829-1001408 bp Feature: domain Description: mogA Location: 1 000829-1 001 408 bp Feature: gene Location: 1001409-1001993 bp Ori: CU207211.1_1001409_1001993_- Feature: domain Description: PRK05255 Location: 1001454-1001943 bp Feature: domain Description: PRK05255 Location: 1 001 454-1 001 943 bp Feature: gene Location: 1003154-1004857 bp Ori: CU207211.1_1003154_1004857_+ Feature: domain Description: RVT_N Location: 1003214-1003457 bp Feature: domain Description: RVT_N Location: 1 00321 4-1 003457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1003502-1004150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 003502-1 0041 50 bp Feature: domain Description: YkfC Location: 1004282-1004492 bp Feature: domain Description: YkfC Location: 1 004282-1 004492 bp Feature: domain Description: HNH Note: nucleases Location: 1004687-1004819 bp Feature: domain Description: HNH Note: nucleases Location: 1 004687-1 00481 9 bp Feature: gene Location: 1004977-1006341 bp Ori: CU207211.1_1004977_1006341_+ Gene: pmbA Feature: domain Description: PRK11040 Location: 1005010-1006336 bp Feature: domain Description: PRK1 1 040 Location: 1 00501 0-1 006336 bp Feature: gene Location: 1006476-1007597 bp Ori: CU207211.1_1006476_1007597_+ Feature: domain Description: TAT_signal_seq Location: 1006524-1006584 bp Feature: domain Description: TAT_signal_seq Location: 1 006524-1 006584 bp Feature: domain Description: PBP2_TRAP_alpha-ketoacid Location: 1006614-1007580 bp Feature: domain Description: PBP2_TRAP_alpha-ketoacid Location: 1 00661 4-1 007580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gyrB (TIGR01059), RVT-Retrons, COG3440 (Predicted restriction endonuclease ), mogA (PRK09417), PRK05255 (ribosome-associated protein), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), PRK11040 (peptidase PmbA; Provisional)
TAT_signal_seq (TIGR01409), PBP2_TRAP_alpha-ketoacid (cd13682)