myRT

myRT report for GCA_000026245.1_ASM2624v1

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Seq: CU928145.2 Escherichia coli 55989 chromosome, complete genome (5154862 bp)
Overview 1 RT 1: 3360967-3371727 bp 2 RT 2: 4751241-4757403 bp 3 RT 3: 4766020-4770683 bp 4 RT 4: 4773549-4781313 bp 5 RT 5: 4788948-4792671 bp 6 RT 6: 5043497-5046985 bp Neighborhood of RT #1 [3360967, 3371780] Peptidase_S6 autotrans_barl PHA02517 RVT-GII GIIM PHA02517 VI_ClpV1 Neighborhood of RT #2 [4751241, 4757405] InsE PHA02517 RVT-GII GIIM PHA02517 TonB-siderophor Neighborhood of RT #3 [4766020, 4770685] COG3547 PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #4 [4773549, 4781315] Peptidase_S6 autotrans_barl PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #5 [4788948, 4792706] InsE PHA02517 RVT-GII GIIM PHA02517 TnpB_IS66 Neighborhood of RT #6 [5043497, 5047005] InsE PHA02517 RVT-GII GIIM PHA02517 PHA02517 Feature: gene Location: 3360967-3365085 bp Ori: CAU99295.1 Feature: domain Description: Peptidase_S6 Location: 3361120-3363292 bp Feature: domain Description: Peptidase_S6 Location: 3361 1 20-3363292 bp Feature: domain Description: autotrans_barl Location: 3363856-3365083 bp Feature: domain Description: autotrans_barl Location: 3363856-3365083 bp Feature: gene Location: 3365547-3365963 bp Feature: domain Description: PHA02517 Location: 3365550-3365952 bp Feature: domain Description: PHA0251 7 Location: 3365550-3365952 bp Feature: gene Location: 3366116-3367639 bp Ori: CAU99297.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3366389-3367121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3366389-33671 21 bp Feature: domain Description: GIIM Note: maturase Location: 3367196-3367394 bp Feature: domain Description: GIIM Note: maturase Location: 33671 96-3367394 bp Feature: gene Location: 3368231-3368803 bp Ori: CAU99299.1 Feature: domain Description: PHA02517 Location: 3368384-3368738 bp Feature: domain Description: PHA0251 7 Location: 3368384-3368738 bp Feature: gene Location: 3369231-3371780 bp Ori: CAU99301.1 Feature: domain Description: VI_ClpV1 Location: 3369267-3371727 bp Feature: domain Description: VI_ClpV1 Location: 3369267-3371 727 bp Feature: gene Location: 4751241-4751567 bp Ori: CAQ87057.1 Feature: domain Description: InsE Location: 4751244-4751565 bp Feature: domain Description: InsE Location: 4751 244-4751 565 bp Feature: gene Location: 4751564-4752046 bp Ori: CAQ87058.1 Feature: domain Description: PHA02517 Location: 4751627-4751981 bp Feature: domain Description: PHA0251 7 Location: 4751 627-4751 981 bp Feature: gene Location: 4752638-4754161 bp Ori: CAV01496.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4752911-4753643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 475291 1 -4753643 bp Feature: domain Description: GIIM Note: maturase Location: 4753718-4753916 bp Feature: domain Description: GIIM Note: maturase Location: 475371 8-475391 6 bp Feature: gene Location: 4754278-4754724 bp Feature: domain Description: PHA02517 Location: 4754281-4754722 bp Feature: domain Description: PHA0251 7 Location: 4754281 -4754722 bp Feature: gene Location: 4755126-4757405 bp Ori: CAV01498.1 Gene: iutA Feature: domain Description: TonB-siderophor Location: 4755342-4757403 bp Feature: domain Description: TonB-siderophor Location: 4755342-4757403 bp Feature: gene Location: 4766020-4767153 bp Ori: CAV01514.1 Feature: domain Description: COG3547 Location: 4766047-4767025 bp Feature: domain Description: COG3547 Location: 4766047-4767025 bp Feature: gene Location: 4767202-4767648 bp Feature: domain Description: PHA02517 Location: 4767205-4767646 bp Feature: domain Description: PHA0251 7 Location: 4767205-4767646 bp Feature: gene Location: 4767765-4769288 bp Ori: CAV01518.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4768038-4768770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4768038-4768770 bp Feature: domain Description: GIIM Note: maturase Location: 4768845-4769043 bp Feature: domain Description: GIIM Note: maturase Location: 4768845-4769043 bp Feature: gene Location: 4769880-4770362 bp Ori: CAV01520.1 Feature: domain Description: PHA02517 Location: 4769943-4770297 bp Feature: domain Description: PHA0251 7 Location: 4769943-4770297 bp Feature: gene Location: 4770359-4770685 bp Ori: CAV01521.1 Feature: domain Description: InsE Location: 4770362-4770683 bp Feature: domain Description: InsE Location: 4770362-4770683 bp Feature: gene Location: 4773549-4777667 bp Ori: CAV01532.1 Feature: domain Description: Peptidase_S6 Location: 4773702-4775874 bp Feature: domain Description: Peptidase_S6 Location: 4773702-4775874 bp Feature: domain Description: autotrans_barl Location: 4776438-4777665 bp Feature: domain Description: autotrans_barl Location: 4776438-4777665 bp Feature: gene Location: 4777832-4778218 bp Feature: domain Description: PHA02517 Location: 4777835-4778216 bp Feature: domain Description: PHA0251 7 Location: 4777835-477821 6 bp Feature: gene Location: 4778395-4779918 bp Ori: CAV01535.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4778668-4779400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4778668-4779400 bp Feature: domain Description: GIIM Note: maturase Location: 4779475-4779673 bp Feature: domain Description: GIIM Note: maturase Location: 4779475-4779673 bp Feature: gene Location: 4780510-4780992 bp Ori: CAV01537.1 Feature: domain Description: PHA02517 Location: 4780573-4780927 bp Feature: domain Description: PHA0251 7 Location: 4780573-4780927 bp Feature: gene Location: 4780989-4781315 bp Ori: CAV01539.1 Feature: domain Description: InsE Location: 4780992-4781313 bp Feature: domain Description: InsE Location: 4780992-4781 31 3 bp Feature: gene Location: 4788948-4789274 bp Ori: CAV01553.1 Feature: domain Description: InsE Location: 4788951-4789272 bp Feature: domain Description: InsE Location: 4788951 -4789272 bp Feature: gene Location: 4789271-4789753 bp Ori: CAV01555.1 Feature: domain Description: PHA02517 Location: 4789334-4789688 bp Feature: domain Description: PHA0251 7 Location: 4789334-4789688 bp Feature: gene Location: 4790345-4791868 bp Ori: CAQ87059.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4790618-4791350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 479061 8-4791 350 bp Feature: domain Description: GIIM Note: maturase Location: 4791425-4791623 bp Feature: domain Description: GIIM Note: maturase Location: 4791 425-4791 623 bp Feature: gene Location: 4791985-4792431 bp Feature: domain Description: PHA02517 Location: 4791988-4792429 bp Feature: domain Description: PHA0251 7 Location: 4791 988-4792429 bp Feature: gene Location: 4792434-4792706 bp Feature: domain Description: TnpB_IS66 Location: 4792461-4792671 bp Feature: domain Description: TnpB_IS66 Location: 4792461 -4792671 bp Feature: gene Location: 5043497-5043841 bp Ori: CAV02028.1 Feature: domain Description: InsE Location: 5043578-5043827 bp Feature: domain Description: InsE Location: 5043578-5043827 bp Feature: gene Location: 5043897-5044322 bp Gene: insO Feature: domain Description: PHA02517 Location: 5043921-5044257 bp Feature: domain Description: PHA0251 7 Location: 5043921 -5044257 bp Feature: gene Location: 5044914-5046437 bp Ori: CAV02032.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5045187-5045919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50451 87-504591 9 bp Feature: domain Description: GIIM Note: maturase Location: 5045994-5046192 bp Feature: domain Description: GIIM Note: maturase Location: 5045994-50461 92 bp Feature: gene Location: 5046590-5046766 bp Gene: insO Feature: domain Description: PHA02517 Location: 5046593-5046695 bp Feature: domain Description: PHA0251 7 Location: 5046593-5046695 bp Feature: gene Location: 5046835-5047005 bp Feature: domain Description: PHA02517 Location: 5046841-5046985 bp Feature: domain Description: PHA0251 7 Location: 5046841 -5046985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), VI_ClpV1 (TIGR03345), InsE (COG2963), TonB-siderophor (TIGR01783), COG3547 (Transposase ), TnpB_IS66 (pfam05717)