myRT

myRT report for GCA_000026505.1_ASM2650v1

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Seq: FM179322.1 Lactobacillus rhamnosus GG whole genome sequence, strain GG (ATCC 53103) (3010111 bp)
Overview 1 RT 1: 1993822-2002193 bp Neighborhood of RT #1 [1993822, 2002324] LysM SMC_prok_B HTH_XRE RVT-UG2 DDE_Tnp_1_2 DUF772 Feature: gene Location: 1993822-1997424 bp Ori: CAR87848.1 Feature: domain Description: LysM Location: 1994110-1994248 bp Feature: domain Description: LysM Location: 1 9941 1 0-1 994248 bp Feature: domain Description: SMC_prok_B Location: 1994473-1995337 bp Feature: domain Description: SMC_prok_B Location: 1 994473-1 995337 bp Feature: gene Location: 1998081-1998407 bp Ori: CAR87849.1 Gene: lciIC Feature: domain Description: HTH_XRE Location: 1998108-1998279 bp Feature: domain Description: HTH_XRE Location: 1 9981 08-1 998279 bp Feature: gene Location: 1999084-2000670 bp Ori: CAR87850.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1999294-2000164 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 999294-20001 64 bp Feature: gene Location: 2000908-2001765 bp Ori: CAR87851.1 Gene: is48 Feature: domain Description: DDE_Tnp_1_2 Location: 2001385-2001613 bp Feature: domain Description: DDE_Tnp_1 _2 Location: 2001 385-2001 61 3 bp Feature: gene Location: 2001821-2002324 bp Ori: CAR87852.1 Gene: is49 Feature: domain Description: DUF772 Location: 2001983-2002193 bp Feature: domain Description: DUF772 Location: 2001 983-20021 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysM (smart00257), SMC_prok_B (TIGR02168), HTH_XRE (smart00530), RVT-UG2, DDE_Tnp_1_2 (pfam13586), DUF772 (pfam05598)