myRT

myRT report for GCA_000026545.1_ASM2654v1

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Seq: FM180568.1 Escherichia coli 0127:H6 E2348/69 complete genome, strain E2348/69 (4965553 bp)
Overview 1 RT 1: 1697259-1704268 bp 2 RT 2: 4060302-4064178 bp Neighborhood of RT #1 [1697259, 1704270] AAA_23 Smc RVT-Retrons HipA_Ec_like PRK09726 Neighborhood of RT #2 [4060302, 4064183] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 1697259-1698359 bp Feature: gene Location: 1698837-1700663 bp Ori: CAS09184.1 Feature: domain Description: AAA_23 Location: 1698891-1699626 bp Feature: domain Description: AAA_23 Location: 1 698891 -1 699626 bp Feature: domain Description: Smc Location: 1699872-1700163 bp Feature: domain Description: Smc Location: 1 699872-1 7001 63 bp Feature: gene Location: 1701660-1702061 bp Ori: CAS09185.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1701762-1702005 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 701 762-1 702005 bp Feature: gene Location: 1702682-1704004 bp Ori: CAS09186.1 Gene: hipA Feature: domain Description: HipA_Ec_like Location: 1702745-1703981 bp Feature: domain Description: HipA_Ec_like Location: 1 702745-1 703981 bp Feature: gene Location: 1704004-1704270 bp Ori: CAS09187.1 Gene: hipB Feature: domain Description: PRK09726 Location: 1704007-1704268 bp Feature: domain Description: PRK09726 Location: 1 704007-1 704268 bp Feature: gene Location: 4060302-4060757 bp Ori: CAS11436.1 Gene: dut Feature: domain Description: dut Location: 4060305-4060752 bp Feature: domain Description: dut Location: 4060305-4060752 bp Feature: gene Location: 4060864-4061460 bp Ori: CAS11437.1 Gene: slmA Feature: domain Description: slmA Location: 4060870-4061446 bp Feature: domain Description: slmA Location: 4060870-4061 446 bp Feature: gene Location: 4061504-4062463 bp Ori: CAS11438.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4061639-4062188 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4061 639-40621 88 bp Feature: gene Location: 4062760-4063401 bp Ori: CAS11439.1 Gene: pyrE Feature: domain Description: pyrE Location: 4062763-4063396 bp Feature: domain Description: pyrE Location: 4062763-4063396 bp Feature: gene Location: 4063467-4064183 bp Ori: CAS11440.1 Gene: rph Feature: domain Description: rph Location: 4063470-4064178 bp Feature: domain Description: rph Location: 4063470-40641 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), Smc (COG1196), RVT-Retrons, HipA_Ec_like (cd17808), PRK09726 (type II toxin-antitoxin system antitoxin HipB), dut (TIGR00576), slmA (PRK09480), pyrE (TIGR00336), rph (PRK00173)