myRT

myRT report for GCA_000026605.1_ASM2660v1

Download annotations/find similar RTs

Seq: FM204884.1 Streptococcus equi subsp. zooepidemicus H70, complete genome (2149868 bp)
Overview 1 RT 1: 1440846-1443098 bp 2 RT 2: 1951692-1951940 bp 3 RT 3: 1970645-1970097 bp 4 RT 4: 1988471-1991032 bp Neighborhood of RT #1 [1440846, 1443103] Maff2 Maff2 RVT-GII RVT-GII HNHc SSB_OBF Uup Uup Neighborhood of RT #2 [1951692, 1951940] Relaxase RVT-GII Intron_maturas2 Neighborhood of RT #3 [1970645, 1970135] MutL_C N6_Mtase COG4646 KOG1000 RVT-GII Intron_maturas2 HNHc Neighborhood of RT #4 [1988471, 1991076] TraC-F-type RVT_N RVT-GII GIIM PrgI TrbL Feature: gene Location: 1440846-1440959 bp Feature: domain Description: Maff2 Location: 1440849-1440960 bp Feature: domain Description: Maff2 Location: 1 440849-1 440960 bp Feature: gene Location: 1437993-1438091 bp Feature: domain Description: Maff2 Location: 1437996-1438086 bp Feature: domain Description: Maff2 Location: 1 437996-1 438086 bp Feature: gene Location: 1439526-1440113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1439853-1440114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 439853-1 4401 1 4 bp Feature: gene Location: 1438245-1439522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1438257-1438719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 438257-1 43871 9 bp Feature: domain Description: HNHc Note: nucleases Location: 1439250-1439412 bp Feature: domain Description: HNHc Note: nucleases Location: 1 439250-1 43941 2 bp Feature: gene Location: 1440963-1441274 bp Ori: CAW99816.1 Feature: domain Description: SSB_OBF Location: 1440990-1441230 bp Feature: domain Description: SSB_OBF Location: 1 440990-1 441 230 bp Feature: gene Location: 1441625-1443103 bp Ori: CAW99818.1 Feature: domain Description: Uup Location: 1441634-1441811 bp Feature: domain Description: Uup Location: 1 441 634-1 441 81 1 bp Feature: domain Description: Uup Location: 1441883-1443098 bp Feature: domain Description: Uup Location: 1 441 883-1 443098 bp Feature: gene Location: 1951692-1951748 bp Feature: gene Location: 1951383-1951688 bp Feature: domain Description: Relaxase Location: 1951395-1951689 bp Feature: domain Description: Relaxase Location: 1 951 395-1 951 689 bp Feature: gene Location: 1951944-1953662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1952220-1953024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 952220-1 953024 bp Feature: domain Description: Intron_maturas2 Location: 1953132-1953411 bp Feature: domain Description: Intron_maturas2 Location: 1 9531 32-1 95341 1 bp Feature: gene Location: 1951863-1951940 bp Feature: gene Location: 1970645-1976116 bp Feature: domain Description: MutL_C Location: 1971494-1971743 bp Feature: domain Description: MutL_C Location: 1 971 494-1 971 743 bp Feature: domain Description: N6_Mtase Location: 1972661-1973270 bp Feature: domain Description: N6_Mtase Location: 1 972661 -1 973270 bp Feature: domain Description: COG4646 Location: 1973843-1975973 bp Feature: domain Description: COG4646 Location: 1 973843-1 975973 bp Feature: gene Location: 1966876-1968249 bp Ori: CAX00640.1 Feature: domain Description: KOG1000 Location: 1967185-1967500 bp Feature: domain Description: KOG1 000 Location: 1 9671 85-1 967500 bp Feature: gene Location: 1968357-1970135 bp Ori: CAX00642.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1968618-1969410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 96861 8-1 96941 0 bp Feature: domain Description: Intron_maturas2 Location: 1969515-1969746 bp Feature: domain Description: Intron_maturas2 Location: 1 96951 5-1 969746 bp Feature: domain Description: HNHc Note: nucleases Location: 1969911-1970097 bp Feature: domain Description: HNHc Note: nucleases Location: 1 96991 1 -1 970097 bp Feature: gene Location: 1988471-1988701 bp Feature: gene Location: 1985274-1986161 bp Feature: domain Description: TraC-F-type Location: 1985289-1985982 bp Feature: domain Description: TraC-F-type Location: 1 985289-1 985982 bp Feature: gene Location: 1986247-1987944 bp Ori: CAX00657.1 Feature: domain Description: RVT_N Location: 1986343-1986583 bp Feature: domain Description: RVT_N Location: 1 986343-1 986583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1986631-1987291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 986631 -1 987291 bp Feature: domain Description: GIIM Note: maturase Location: 1987360-1987579 bp Feature: domain Description: GIIM Note: maturase Location: 1 987360-1 987579 bp Feature: gene Location: 1989890-1990159 bp Feature: domain Description: PrgI Location: 1989902-1990076 bp Feature: domain Description: PrgI Location: 1 989902-1 990076 bp Feature: gene Location: 1990222-1991076 bp Ori: CAX00660.1 Feature: domain Description: TrbL Location: 1990621-1991032 bp Feature: domain Description: TrbL Location: 1 990621 -1 991 032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), RVT-GII, HNHc (smart00507), SSB_OBF (cd04496), Uup (COG0488), Relaxase (pfam03432), Intron_maturas2 (pfam01348), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), TraC-F-type (TIGR02746), RVT_N (pfam13655)
GIIM (pfam08388), PrgI (pfam12666), TrbL (pfam04610)