myRT

myRT report for GCA_000062885.1_ASM6288v1

Download annotations/find similar RTs

Seq: AM420293.1 Saccharopolyspora erythraea NRRL2338 complete genome (8212805 bp)
Overview 1 RT 1: 2505684-2509260 bp 2 RT 2: 6413300-6418985 bp Neighborhood of RT #1 [2505684, 2509260] DDE_Tnp_1 DUF4096 RVT-GII GIIM COG3293 COG3293 Neighborhood of RT #2 [6413300, 6418985] LysR DedA RVT-Retrons Peptidase_S13 Feature: gene Location: 2505684-2505983 bp Ori: CAM01614.1 Gene: tnp9B Feature: domain Description: DDE_Tnp_1 Location: 2505693-2505981 bp Feature: domain Description: DDE_Tnp_1 Location: 2505693-2505981 bp Feature: gene Location: 2505998-2506318 bp Ori: CAM01615.1 Feature: domain Description: DUF4096 Location: 2506004-2506220 bp Feature: domain Description: DUF4096 Location: 2506004-2506220 bp Feature: gene Location: 2506471-2507448 bp Ori: CAM01616.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2506477-2507062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2506477-2507062 bp Feature: domain Description: GIIM Note: maturase Location: 2507143-2507374 bp Feature: domain Description: GIIM Note: maturase Location: 25071 43-2507374 bp Feature: gene Location: 2507612-2508436 bp Ori: CAM01617.1 Feature: domain Description: COG3293 Location: 2507636-2507906 bp Feature: domain Description: COG3293 Location: 2507636-2507906 bp Feature: domain Description: COG3293 Location: 2508020-2508347 bp Feature: domain Description: COG3293 Location: 2508020-2508347 bp Feature: gene Location: 2508709-2509260 bp Feature: gene Location: 6413300-6414190 bp Ori: CAM04895.1 Feature: domain Description: LysR Location: 6413315-6414185 bp Feature: domain Description: LysR Location: 641 331 5-641 41 85 bp Feature: gene Location: 6414276-6414950 bp Ori: CAM04896.1 Feature: domain Description: DedA Location: 6414336-6414888 bp Feature: domain Description: DedA Location: 641 4336-641 4888 bp Feature: gene Location: 6415158-6416456 bp Ori: CAM04897.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6415587-6416226 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 641 5587-641 6226 bp Feature: gene Location: 6416808-6418346 bp Ori: CAM04898.1 Gene: dacC%2C pbp Feature: domain Description: Peptidase_S13 Location: 6416877-6418224 bp Feature: domain Description: Peptidase_S1 3 Location: 641 6877-641 8224 bp Feature: gene Location: 6418701-6418985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), DUF4096 (pfam13340), RVT-GII, GIIM (pfam08388), COG3293 (Transposase ), LysR (COG0583), DedA (COG0586), RVT-Retrons, Peptidase_S13 (pfam02113)