myRT

myRT report for GCA_000067205.1_ASM6720v1

Download annotations/find similar RTs

Seq: AM902716.1 Bordetella petrii strain DSM 12804, complete genome (5287950 bp)
Overview 1 RT 1: 1121344-1129504 bp 2 RT 2: 1522825-1530548 bp 3 RT 3: 2114560-2122277 bp 4 RT 4: 4540566-4557492 bp Neighborhood of RT #1 [1121344, 1129504] RVT_N RVT-GII GIIM HNHc RVT_N RVT-GII GIIM HNH Neighborhood of RT #2 [1522825, 1530548] AdoMet_MTases RVT-GII Intron_maturas2 HNHc HepA SF2_C_SNF Neighborhood of RT #3 [2114560, 2122285] HflK_N SPFH_HflK SPFH_HflC RVT_N RVT-GII GIIM HNHc PRK12421 PRK01117 Neighborhood of RT #4 [4540566, 4557515] YbjD YbjD DEXHc_Snf DEXHc_Snf SF2_C_SNF RVT-GII Intron_maturas2 HNHc AdoMet_MTases RVT_N RVT-GII GIIM HNH InsE PHA02517 RVT_N RVT-GII GIIM HNHc DUF3275 Feature: gene Location: 1121344-1121682 bp Feature: gene Location: 1121789-1122088 bp Feature: gene Location: 1122690-1124408 bp Ori: CAP41389.1 Feature: domain Description: RVT_N Location: 1122747-1122984 bp Feature: domain Description: RVT_N Location: 1 1 22747-1 1 22984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1123035-1123686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 23035-1 1 23686 bp Feature: domain Description: GIIM Note: maturase Location: 1123740-1123971 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 23740-1 1 23971 bp Feature: domain Description: HNHc Note: nucleases Location: 1124205-1124361 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 24205-1 1 24361 bp Feature: gene Location: 1124627-1124887 bp Feature: gene Location: 1124964-1125611 bp Feature: gene Location: 1126339-1128054 bp Ori: CAP41392.1 Feature: domain Description: RVT_N Location: 1126396-1126639 bp Feature: domain Description: RVT_N Location: 1 1 26396-1 1 26639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1126684-1127329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 26684-1 1 27329 bp Feature: domain Description: GIIM Note: maturase Location: 1127386-1127617 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 27386-1 1 2761 7 bp Feature: domain Description: HNH Note: nucleases Location: 1127875-1128010 bp Feature: domain Description: HNH Note: nucleases Location: 1 1 27875-1 1 2801 0 bp Feature: gene Location: 1128185-1129132 bp Feature: gene Location: 1129184-1129504 bp Feature: gene Location: 1522825-1523475 bp Feature: gene Location: 1523540-1524649 bp Ori: CAP41809.1 Feature: domain Description: AdoMet_MTases Location: 1523663-1524020 bp Feature: domain Description: AdoMet_MTases Location: 1 523663-1 524020 bp Feature: gene Location: 1525670-1527490 bp Ori: CAP41810.1 Gene: ltrA2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1525937-1526768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 525937-1 526768 bp Feature: domain Description: Intron_maturas2 Location: 1526849-1527149 bp Feature: domain Description: Intron_maturas2 Location: 1 526849-1 5271 49 bp Feature: domain Description: HNHc Note: nucleases Location: 1527287-1527467 bp Feature: domain Description: HNHc Note: nucleases Location: 1 527287-1 527467 bp Feature: gene Location: 1527718-1529565 bp Ori: CAP41811.1 Feature: domain Description: HepA Location: 1528099-1528459 bp Feature: domain Description: HepA Location: 1 528099-1 528459 bp Feature: domain Description: SF2_C_SNF Location: 1529014-1529401 bp Feature: domain Description: SF2_C_SNF Location: 1 52901 4-1 529401 bp Feature: gene Location: 1529679-1530548 bp Feature: gene Location: 2114560-2115837 bp Ori: CAP42367.1 Gene: hflK Feature: domain Description: HflK_N Location: 2114584-2114731 bp Feature: domain Description: HflK_N Location: 21 1 4584-21 1 4731 bp Feature: domain Description: SPFH_HflK Location: 2114803-2115622 bp Feature: domain Description: SPFH_HflK Location: 21 1 4803-21 1 5622 bp Feature: gene Location: 2115856-2116746 bp Ori: CAP42368.1 Gene: hflC Feature: domain Description: SPFH_HflC Location: 2115919-2116669 bp Feature: domain Description: SPFH_HflC Location: 21 1 591 9-21 1 6669 bp Feature: gene Location: 2117810-2119513 bp Ori: CAP42369.1 Feature: domain Description: RVT_N Location: 2117864-2118107 bp Feature: domain Description: RVT_N Location: 21 1 7864-21 1 81 07 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2118152-2118800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 1 81 52-21 1 8800 bp Feature: domain Description: GIIM Note: maturase Location: 2118851-2119085 bp Feature: domain Description: GIIM Note: maturase Location: 21 1 8851 -21 1 9085 bp Feature: domain Description: HNHc Note: nucleases Location: 2119316-2119469 bp Feature: domain Description: HNHc Note: nucleases Location: 21 1 931 6-21 1 9469 bp Feature: gene Location: 2119753-2120910 bp Ori: CAP42370.1 Gene: hisZ Feature: domain Description: PRK12421 Location: 2119762-2120905 bp Feature: domain Description: PRK1 2421 Location: 21 1 9762-21 20905 bp Feature: gene Location: 2120990-2122285 bp Ori: CAP42371.1 Gene: purA Feature: domain Description: PRK01117 Location: 2120999-2122277 bp Feature: domain Description: PRK01 1 1 7 Location: 21 20999-21 22277 bp Feature: gene Location: 4540566-4542368 bp Ori: CAP44632.1 Feature: domain Description: YbjD Location: 4540569-4540851 bp Feature: domain Description: YbjD Location: 4540569-4540851 bp Feature: domain Description: YbjD Location: 4541478-4542045 bp Feature: domain Description: YbjD Location: 4541 478-4542045 bp Feature: gene Location: 4542541-4544475 bp Ori: CAP44633.1 Feature: domain Description: DEXHc_Snf Location: 4542562-4542673 bp Feature: domain Description: DEXHc_Snf Location: 4542562-4542673 bp Feature: domain Description: DEXHc_Snf Location: 4543237-4543423 bp Feature: domain Description: DEXHc_Snf Location: 4543237-4543423 bp Feature: domain Description: SF2_C_SNF Location: 4543912-4544311 bp Feature: domain Description: SF2_C_SNF Location: 454391 2-454431 1 bp Feature: gene Location: 4544616-4546436 bp Ori: CAP44634.1 Gene: ltrA1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4544883-4545714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4544883-454571 4 bp Feature: domain Description: Intron_maturas2 Location: 4545795-4546095 bp Feature: domain Description: Intron_maturas2 Location: 4545795-4546095 bp Feature: domain Description: HNHc Note: nucleases Location: 4546233-4546413 bp Feature: domain Description: HNHc Note: nucleases Location: 4546233-454641 3 bp Feature: gene Location: 4547019-4547357 bp Feature: gene Location: 4547493-4547798 bp Feature: gene Location: 4547868-4548179 bp Feature: gene Location: 4548282-4549307 bp Ori: CAP44638.1 Feature: domain Description: AdoMet_MTases Location: 4548321-4548678 bp Feature: domain Description: AdoMet_MTases Location: 4548321 -4548678 bp Feature: gene Location: 4549438-4551153 bp Ori: CAP44639.1 Feature: domain Description: RVT_N Location: 4549495-4549738 bp Feature: domain Description: RVT_N Location: 4549495-4549738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4549783-4550428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4549783-4550428 bp Feature: domain Description: GIIM Note: maturase Location: 4550485-4550716 bp Feature: domain Description: GIIM Note: maturase Location: 4550485-455071 6 bp Feature: domain Description: HNH Note: nucleases Location: 4550974-4551109 bp Feature: domain Description: HNH Note: nucleases Location: 4550974-4551 1 09 bp Feature: gene Location: 4551433-4551720 bp Ori: CAP44640.1 Gene: tnp25 Feature: domain Description: InsE Location: 4551448-4551709 bp Feature: domain Description: InsE Location: 4551 448-4551 709 bp Feature: gene Location: 4551717-4552607 bp Ori: CAP44641.1 Feature: domain Description: PHA02517 Location: 4551783-4552602 bp Feature: domain Description: PHA0251 7 Location: 4551 783-4552602 bp Feature: gene Location: 4553166-4553816 bp Feature: gene Location: 4554103-4555821 bp Ori: CAP44643.1 Feature: domain Description: RVT_N Location: 4554160-4554397 bp Feature: domain Description: RVT_N Location: 45541 60-4554397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4554448-4555099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4554448-4555099 bp Feature: domain Description: GIIM Note: maturase Location: 4555153-4555384 bp Feature: domain Description: GIIM Note: maturase Location: 45551 53-4555384 bp Feature: domain Description: HNHc Note: nucleases Location: 4555618-4555774 bp Feature: domain Description: HNHc Note: nucleases Location: 455561 8-4555774 bp Feature: gene Location: 4556423-4556722 bp Feature: gene Location: 4556817-4557515 bp Ori: CAP44645.1 Feature: domain Description: DUF3275 Location: 4556859-4557492 bp Feature: domain Description: DUF3275 Location: 4556859-4557492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), HNH (pfam01844), AdoMet_MTases (cl17173), Intron_maturas2 (pfam01348), HepA (COG0553), SF2_C_SNF (cd18793), HflK_N (pfam12221)
SPFH_HflK (cd03404), SPFH_HflC (cd03405), PRK12421 (ATP phosphoribosyltransferase regulatory subunit; Provisional), PRK01117 (adenylosuccinate synthetase; Provisional), YbjD (COG3593), DEXHc_Snf (cd17919), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), DUF3275 (pfam11679)