myRT

myRT report for GCA_000069925.1_ASM6992v1

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Seq: AM422018.1 Candidatus Phytoplasma australiense complete genome (879959 bp)
Overview 1 RT 1: 36640-40968 bp 2 RT 2: 109938-115686 bp 3 RT 3: 246534-252073 bp 4 RT 4: 322234-326465 bp 5 RT 5: 461104-470196 bp Neighborhood of RT #1 [36640, 41159] RVT-GII RVT-GII KOG4674 SMC_prok_B Neighborhood of RT #2 [109938, 115712] KOG4768 RVT-GII leuS gmk Neighborhood of RT #3 [246534, 252075] DnaB RVT-GII KOG4768 gyrB Neighborhood of RT #4 [322234, 326524] RMtype1_S_EcoJA65PI-TRD1-CR1_like HsdM RVT-GII Intron_maturas2 group_II_RT_mat HsdM Neighborhood of RT #5 [461104, 470207] PHA02517 KOG4768 RVT-GII group_II_RT_mat PHA02517 SVM_signal RVT-GII Intron_maturas2 KOG4674 DivIC DivIC DivIC Feature: gene Location: 36640-37443 bp Feature: gene Location: 37473-37928 bp Feature: gene Location: 37994-38404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38063-38267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38063-38267 bp Feature: gene Location: 38355-39149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38640-39078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38640-39078 bp Feature: gene Location: 39721-40080 bp Feature: domain Description: KOG4674 Location: 39802-40039 bp Feature: domain Description: KOG4674 Location: 39802-40039 bp Feature: gene Location: 40182-41159 bp Feature: domain Description: SMC_prok_B Location: 40230-40968 bp Feature: domain Description: SMC_prok_B Location: 40230-40968 bp Feature: gene Location: 109938-110414 bp Feature: domain Description: KOG4768 Location: 109947-110355 bp Feature: domain Description: KOG4768 Location: 1 09947-1 1 0355 bp Feature: gene Location: 110494-110649 bp Feature: gene Location: 110637-111368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110922-111333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 0922-1 1 1 333 bp Feature: gene Location: 112526-114970 bp Ori: CAM11439.1 Gene: leuS Feature: domain Description: leuS Location: 112541-114965 bp Feature: domain Description: leuS Location: 1 1 2541 -1 1 4965 bp Feature: gene Location: 115074-115712 bp Ori: CAM11440.1 Gene: gmk Feature: domain Description: gmk Location: 115086-115686 bp Feature: domain Description: gmk Location: 1 1 5086-1 1 5686 bp Feature: gene Location: 246534-246770 bp Feature: gene Location: 246793-248076 bp Ori: CAM11545.1 Feature: domain Description: DnaB Location: 246799-248068 bp Feature: domain Description: DnaB Location: 246799-248068 bp Feature: gene Location: 248157-248843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 248316-248769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24831 6-248769 bp Feature: gene Location: 248977-249777 bp Feature: domain Description: KOG4768 Location: 248986-249724 bp Feature: domain Description: KOG4768 Location: 248986-249724 bp Feature: gene Location: 250087-252075 bp Ori: CAM11548.1 Gene: gyrB Feature: domain Description: gyrB Location: 250093-252073 bp Feature: domain Description: gyrB Location: 250093-252073 bp Feature: gene Location: 322234-322683 bp Feature: domain Description: RMtype1_S_EcoJA65PI-TRD1-CR1_like Location: 322342-322675 bp Feature: domain Description: RMtype1 _S_EcoJA65PI-TRD1 -CR1 _like Location: 322342-322675 bp Feature: gene Location: 322909-323424 bp Feature: domain Description: HsdM Location: 322990-323416 bp Feature: domain Description: HsdM Location: 322990-32341 6 bp Feature: gene Location: 323454-324845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 323460-324117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 323460-3241 1 7 bp Feature: domain Description: Intron_maturas2 Location: 324279-324486 bp Feature: domain Description: Intron_maturas2 Location: 324279-324486 bp Feature: gene Location: 324862-325200 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 324982-325165 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 324982-3251 65 bp Feature: gene Location: 325772-326524 bp Feature: domain Description: HsdM Location: 325904-326465 bp Feature: domain Description: HsdM Location: 325904-326465 bp Feature: gene Location: 461104-461430 bp Feature: domain Description: PHA02517 Location: 461185-461410 bp Feature: domain Description: PHA0251 7 Location: 461 1 85-461 41 0 bp Feature: gene Location: 461479-461766 bp Feature: domain Description: KOG4768 Location: 461488-461713 bp Feature: domain Description: KOG4768 Location: 461 488-461 71 3 bp Feature: gene Location: 462021-462842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462030-462672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462030-462672 bp Feature: gene Location: 462826-463065 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 462853-463060 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 462853-463060 bp Feature: gene Location: 463728-464558 bp Feature: domain Description: PHA02517 Location: 463935-464526 bp Feature: domain Description: PHA0251 7 Location: 463935-464526 bp Feature: gene Location: 465707-466708 bp Ori: CAM11803.1 Feature: domain Description: SVM_signal Location: 465710-465803 bp Feature: domain Description: SVM_signal Location: 46571 0-465803 bp Feature: gene Location: 466739-467002 bp Feature: gene Location: 467077-468642 bp Ori: CAM11805.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467362-468094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467362-468094 bp Feature: domain Description: Intron_maturas2 Location: 468229-468445 bp Feature: domain Description: Intron_maturas2 Location: 468229-468445 bp Feature: gene Location: 469214-469573 bp Feature: domain Description: KOG4674 Location: 469295-469559 bp Feature: domain Description: KOG4674 Location: 469295-469559 bp Feature: gene Location: 469833-470207 bp Feature: domain Description: DivIC Location: 469842-469938 bp Feature: domain Description: DivIC Location: 469842-469938 bp Feature: domain Description: DivIC Location: 469953-470097 bp Feature: domain Description: DivIC Location: 469953-470097 bp Feature: domain Description: DivIC Location: 470103-470196 bp Feature: domain Description: DivIC Location: 4701 03-4701 96 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4674 (KOG4674, Uncharacterized conserved coiled-coil protein ), SMC_prok_B (TIGR02168), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), leuS (PRK12300), gmk (PRK14738), DnaB (TIGR00665), gyrB (TIGR01059), RMtype1_S_EcoJA65PI-TRD1-CR1_like (cd17256), HsdM (COG0286)
Intron_maturas2 (pfam01348), group_II_RT_mat (TIGR04416), PHA02517 (putative transposase OrfB; Reviewed), SVM_signal (pfam12113), DivIC (pfam04977)