myRT

myRT report for GCA_000070605.1_ASM7060v1

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Seq: AM920689.1 Xanthomonas campestris pv. campestris complete genome, strain B100 (5079002 bp)
Overview 1 RT 1: 678001-685704 bp 2 RT 2: 3040681-3046186 bp 3 RT 3: 3058507-3063333 bp Neighborhood of RT #1 [678001, 685757] Glyco_hydro_53 aceE RVT-Retrons HTH_XRE ImmA sigma70-ECF HTH_Tnp_1 Neighborhood of RT #2 [3040681, 3046230] TraA_Ti IS5 RVT-UG11 Tra5 Neighborhood of RT #3 [3058507, 3063333] HTH_XRE AAA_21 AAA_21 RVT-Retrons INT_C_like_1 Feature: gene Location: 678001-679002 bp Ori: CAP49939.1 Gene: galA1 Feature: domain Description: Glyco_hydro_53 Location: 678094-679000 bp Feature: domain Description: Glyco_hydro_53 Location: 678094-679000 bp Feature: gene Location: 679379-682066 bp Ori: CAP49940.1 Gene: aceE Feature: domain Description: aceE Location: 679400-682058 bp Feature: domain Description: aceE Location: 679400-682058 bp Feature: gene Location: 682291-683985 bp Ori: CAP49941.1 Gene: rt Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 682444-683026 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 682444-683026 bp Feature: gene Location: 684241-685449 bp Ori: CAP49942.1 Feature: domain Description: HTH_XRE Location: 684283-684439 bp Feature: domain Description: HTH_XRE Location: 684283-684439 bp Feature: domain Description: ImmA Location: 684697-685228 bp Feature: domain Description: ImmA Location: 684697-685228 bp Feature: domain Description: sigma70-ECF Location: 685300-685420 bp Feature: domain Description: sigma70-ECF Location: 685300-685420 bp Feature: gene Location: 685488-685757 bp Ori: CAP49943.1 Feature: domain Description: HTH_Tnp_1 Location: 685500-685704 bp Feature: domain Description: HTH_Tnp_1 Location: 685500-685704 bp Feature: gene Location: 3040681-3042276 bp Ori: CAP51990.1 Gene: mobL2 Feature: domain Description: TraA_Ti Location: 3040684-3041449 bp Feature: domain Description: TraA_Ti Location: 3040684-3041 449 bp Feature: gene Location: 3042770-3043750 bp Ori: CAP51992.1 Feature: domain Description: IS5 Location: 3042956-3043727 bp Feature: domain Description: IS5 Location: 3042956-3043727 bp Feature: gene Location: 3044057-3044761 bp Ori: CAP51993.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3044129-3044573 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 30441 29-3044573 bp Feature: gene Location: 3044809-3044931 bp Feature: gene Location: 3045397-3046230 bp Ori: CAP51994.1 Feature: domain Description: Tra5 Location: 3045418-3046186 bp Feature: domain Description: Tra5 Location: 304541 8-30461 86 bp Feature: gene Location: 3058507-3058869 bp Ori: CAP52009.1 Feature: domain Description: HTH_XRE Location: 3058552-3058738 bp Feature: domain Description: HTH_XRE Location: 3058552-3058738 bp Feature: gene Location: 3058909-3060234 bp Ori: CAP52010.1 Feature: domain Description: AAA_21 Location: 3058978-3059347 bp Feature: domain Description: AAA_21 Location: 3058978-3059347 bp Feature: domain Description: AAA_21 Location: 3059401-3059641 bp Feature: domain Description: AAA_21 Location: 3059401 -3059641 bp Feature: gene Location: 3060246-3061202 bp Ori: CAP52011.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3060360-3060909 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3060360-3060909 bp Feature: gene Location: 3061417-3062817 bp Ori: CAP52012.1 Gene: int4 Feature: domain Description: INT_C_like_1 Location: 3062080-3062680 bp Feature: domain Description: INT_C_like_1 Location: 3062080-3062680 bp Feature: gene Location: 3063151-3063333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_hydro_53 (pfam07745), aceE (TIGR00759), RVT-Retrons, HTH_XRE (smart00530), ImmA (COG2856), sigma70-ECF (TIGR02937), HTH_Tnp_1 (pfam01527), TraA_Ti (TIGR02768), IS5 (COG3039), RVT-UG11
Tra5 (COG2801), AAA_21 (pfam13304), INT_C_like_1 (cd01184)