myRT

myRT report for GCA_000091785.1_ASM9178v1

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Seq: FN650140.1 Legionella longbeachae NSW150, complete genome (4077332 bp)
Overview 1 RT 1: 28323-36451 bp 2 RT 2: 1298744-1306657 bp 3 RT 3: 1616039-1618687 bp 4 RT 4: 2201227-2207257 bp 5 RT 5: 2212285-2219456 bp 6 RT 6: 2489356-2493685 bp 7 RT 7: 3991551-3998495 bp Neighborhood of RT #1 [28323, 36465] YciA COG3666 DDE_Tnp_1_3 DDE_Tnp_1_6 RVT_N RVT-GII PRK11768 DEAH_box_HrpB Neighborhood of RT #2 [1298744, 1306680] PRK08961 Toluene_X RVT-GII GIIM ALAD_PBGS Neighborhood of RT #3 [1616039, 1618687] RVT-UG18 Neighborhood of RT #4 [2201227, 2207262] PRK13169 DDE_Tnp_IS66 RVT-GII GIIM MhpC PRK13516 Neighborhood of RT #5 [2212285, 2219500] MFS_1 SidC_N RVT-UG18 DDE_Tnp_1_3 MS_channel Neighborhood of RT #6 [2489356, 2493732] ArsR RVT-UG18 RND_mfp HlyD_3 PRK11556 Neighborhood of RT #7 [3991551, 3998495] PRK10060 RVT-UNC CAP_ED CPBP Feature: gene Location: 28323-28712 bp Feature: domain Description: YciA Location: 28338-28692 bp Feature: domain Description: YciA Location: 28338-28692 bp Feature: gene Location: 28790-30154 bp Feature: domain Description: COG3666 Location: 28823-29264 bp Feature: domain Description: COG3666 Location: 28823-29264 bp Feature: domain Description: DDE_Tnp_1_3 Location: 29414-29615 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 2941 4-2961 5 bp Feature: domain Description: DDE_Tnp_1_6 Location: 29747-30071 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 29747-30071 bp Feature: gene Location: 30848-31708 bp Feature: domain Description: RVT_N Location: 30899-31142 bp Feature: domain Description: RVT_N Location: 30899-31 1 42 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31187-31691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 1 87-31 691 bp Feature: gene Location: 32623-33603 bp Feature: domain Description: PRK11768 Location: 32635-33592 bp Feature: domain Description: PRK1 1 768 Location: 32635-33592 bp Feature: gene Location: 33865-36465 bp Feature: domain Description: DEAH_box_HrpB Location: 33919-36451 bp Feature: domain Description: DEAH_box_HrpB Location: 3391 9-36451 bp Feature: gene Location: 1298744-1301305 bp Feature: domain Description: PRK08961 Location: 1298747-1301303 bp Feature: domain Description: PRK08961 Location: 1 298747-1 301 303 bp Feature: gene Location: 1301578-1303035 bp Feature: domain Description: Toluene_X Location: 1301626-1302958 bp Feature: domain Description: Toluene_X Location: 1 301 626-1 302958 bp Feature: gene Location: 1303573-1304907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1303858-1304545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 303858-1 304545 bp Feature: domain Description: GIIM Note: maturase Location: 1304614-1304833 bp Feature: domain Description: GIIM Note: maturase Location: 1 30461 4-1 304833 bp Feature: gene Location: 1305077-1305511 bp Feature: gene Location: 1305685-1306680 bp Feature: domain Description: ALAD_PBGS Location: 1305721-1306657 bp Feature: domain Description: ALAD_PBGS Location: 1 305721 -1 306657 bp Feature: gene Location: 1616039-1616374 bp Feature: gene Location: 1616375-1616695 bp Feature: gene Location: 1616888-1617349 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 1617110-1617326 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 1 61 71 1 0-1 61 7326 bp Feature: gene Location: 1617447-1617644 bp Feature: gene Location: 1617698-1618687 bp Feature: gene Location: 2201227-2201385 bp Feature: gene Location: 2201814-2202626 bp Feature: domain Description: PRK13169 Location: 2201847-2202021 bp Feature: domain Description: PRK1 31 69 Location: 2201 847-2202021 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2202312-2202567 bp Feature: domain Description: DDE_Tnp_IS66 Location: 220231 2-2202567 bp Feature: gene Location: 2202940-2204274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2203225-2203912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2203225-220391 2 bp Feature: domain Description: GIIM Note: maturase Location: 2203981-2204200 bp Feature: domain Description: GIIM Note: maturase Location: 2203981 -2204200 bp Feature: gene Location: 2204847-2205710 bp Feature: domain Description: MhpC Location: 2205066-2205648 bp Feature: domain Description: MhpC Location: 2205066-2205648 bp Feature: gene Location: 2206150-2207262 bp Feature: domain Description: PRK13516 Location: 2206153-2207257 bp Feature: domain Description: PRK1 351 6 Location: 22061 53-2207257 bp Feature: gene Location: 2212285-2213538 bp Feature: domain Description: MFS_1 Location: 2212348-2213371 bp Feature: domain Description: MFS_1 Location: 221 2348-221 3371 bp Feature: gene Location: 2213770-2216181 bp Feature: domain Description: SidC_N Location: 2213782-2215162 bp Feature: domain Description: SidC_N Location: 221 3782-221 51 62 bp Feature: gene Location: 2216448-2217374 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 2216673-2217255 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 221 6673-221 7255 bp Feature: gene Location: 2217488-2218381 bp Feature: domain Description: DDE_Tnp_1_3 Location: 2217815-2218265 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 221 781 5-221 8265 bp Feature: gene Location: 2218454-2219500 bp Feature: domain Description: MS_channel Location: 2218847-2219456 bp Feature: domain Description: MS_channel Location: 221 8847-221 9456 bp Feature: gene Location: 2489356-2489664 bp Feature: domain Description: ArsR Location: 2489368-2489644 bp Feature: domain Description: ArsR Location: 2489368-2489644 bp Feature: gene Location: 2489878-2490858 bp Feature: gene Location: 2491207-2491668 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 2491429-2491645 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 2491 429-2491 645 bp Feature: gene Location: 2492168-2492356 bp Feature: gene Location: 2492530-2493732 bp Feature: domain Description: RND_mfp Location: 2492638-2493139 bp Feature: domain Description: RND_mfp Location: 2492638-24931 39 bp Feature: domain Description: HlyD_3 Location: 2493154-2493442 bp Feature: domain Description: HlyD_3 Location: 24931 54-2493442 bp Feature: domain Description: PRK11556 Location: 2493493-2493685 bp Feature: domain Description: PRK1 1 556 Location: 2493493-2493685 bp Feature: gene Location: 3991551-3993197 bp Feature: domain Description: PRK10060 Location: 3991875-3993168 bp Feature: domain Description: PRK1 0060 Location: 3991 875-39931 68 bp Feature: gene Location: 3993223-3993699 bp Feature: gene Location: 3993863-3995335 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3994187-3994823 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 39941 87-3994823 bp Feature: gene Location: 3995310-3996422 bp Feature: domain Description: CAP_ED Location: 3995349-3995649 bp Feature: domain Description: CAP_ED Location: 3995349-3995649 bp Feature: domain Description: CPBP Location: 3996129-3996375 bp Feature: domain Description: CPBP Location: 39961 29-3996375 bp Feature: gene Location: 3996435-3998495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YciA (COG1607), COG3666 (Transposase ), DDE_Tnp_1_3 (pfam13612), DDE_Tnp_1_6 (pfam13751), RVT_N (pfam13655), RVT-GII, PRK11768 (serine/threonine protein kinase), DEAH_box_HrpB (TIGR01970), PRK08961 (bifunctional aspartate kinase/diaminopimelate decarboxylase), Toluene_X (pfam03349)
GIIM (pfam08388), ALAD_PBGS (cl00338), RVT-UG18, PRK13169 (DNA replication initiation control protein YabA), DDE_Tnp_IS66 (pfam03050), MhpC (COG0596), PRK13516 (gamma-glutamyl:cysteine ligase; Provisional), MFS_1 (pfam07690), SidC_N (pfam18219), MS_channel (pfam00924)
ArsR (pfam09824), RND_mfp (TIGR01730), HlyD_3 (pfam13437), PRK11556 (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit), PRK10060 (cyclic di-GMP phosphodiesterase), RVT-DGRs/RVT-UG26/RVT-CRISPR/RVT-UG27(RVT-UNC), CAP_ED (cl00047), CPBP