myRT

myRT report for GCA_000092205.1_ASM9220v1

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Seq: CP001940.1 Desulfurivibrio alkaliphilus AHT2, complete genome (3097763 bp)
Overview 1 RT 1: 1210217-1215187 bp 2 RT 2: 2825340-2831621 bp Neighborhood of RT #1 [1210217, 1215187] IS285 RVT-UG2 Neighborhood of RT #2 [2825340, 2831650] RhaT OYE_like_FMN_family RVT-GII GIIM integrase_gron integrase_gron VapI Feature: gene Location: 1210217-1211467 bp Ori: ADH85709.1 Feature: domain Description: IS285 Location: 1210265-1211399 bp Feature: domain Description: IS285 Location: 1 21 0265-1 21 1 399 bp Feature: gene Location: 1212188-1212568 bp Feature: gene Location: 1212795-1214072 bp Ori: ADH85711.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1212990-1213779 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 21 2990-1 21 3779 bp Feature: gene Location: 1214234-1214407 bp Feature: gene Location: 1214480-1215187 bp Feature: gene Location: 2825340-2826245 bp Ori: ADH87094.1 Feature: domain Description: RhaT Location: 2825358-2826183 bp Feature: domain Description: RhaT Location: 2825358-28261 83 bp Feature: gene Location: 2826301-2827416 bp Ori: ADH87095.1 Feature: domain Description: OYE_like_FMN_family Location: 2826316-2827306 bp Feature: domain Description: OYE_like_FMN_family Location: 282631 6-2827306 bp Feature: gene Location: 2827769-2829295 bp Ori: ADH87096.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2828231-2828846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2828231 -2828846 bp Feature: domain Description: GIIM Note: maturase Location: 2828891-2829107 bp Feature: domain Description: GIIM Note: maturase Location: 2828891 -28291 07 bp Feature: gene Location: 2829867-2831264 bp Ori: ADH87097.1 Feature: domain Description: integrase_gron Location: 2829954-2830134 bp Feature: domain Description: integrase_gron Location: 2829954-28301 34 bp Feature: domain Description: integrase_gron Location: 2830314-2831262 bp Feature: domain Description: integrase_gron Location: 283031 4-2831 262 bp Feature: gene Location: 2831288-2831650 bp Ori: ADH87098.1 Feature: domain Description: VapI Location: 2831345-2831621 bp Feature: domain Description: VapI Location: 2831 345-2831 621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), RVT-UG2, RhaT (TIGR00776), OYE_like_FMN_family (cd02803), RVT-GII, GIIM (pfam08388), integrase_gron (TIGR02249), VapI (COG3093)