myRT

myRT report for GCA_000092385.1_ASM9238v1

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Seq: CP002047.1 Streptomyces bingchenggensis BCW-1, complete genome (11936683 bp)
Overview 1 RT 1: 1285922-1292865 bp 2 RT 2: 2005968-2010056 bp 3 RT 3: 11419237-11428217 bp Neighborhood of RT #1 [1285922, 1292945] YjbR Ggt RVT_N RVT-GII GIIM HNH Acetyltransf_1 F420_MSMEG_4879 Neighborhood of RT #2 [2005968, 2010418] RVT-GII GIIM LpqC Neighborhood of RT #3 [11419237, 11428300] BaeS HTH_Tnp_4 RVT-GII GIIM DDE_Tnp_ISAZ013 RVT-GII GIIM DDE_Tnp_ISAZ013 actII actII Feature: gene Location: 1285922-1286272 bp Ori: ADI04006.1 Feature: domain Description: YjbR Location: 1285958-1286219 bp Feature: domain Description: YjbR Location: 1 285958-1 28621 9 bp Feature: gene Location: 1286421-1288229 bp Ori: ADI04007.1 Feature: domain Description: Ggt Location: 1286442-1288224 bp Feature: domain Description: Ggt Location: 1 286442-1 288224 bp Feature: gene Location: 1289380-1291179 bp Ori: ADI04008.1 Feature: domain Description: RVT_N Location: 1289458-1289701 bp Feature: domain Description: RVT_N Location: 1 289458-1 289701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1289752-1290412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 289752-1 29041 2 bp Feature: domain Description: GIIM Note: maturase Location: 1290466-1290700 bp Feature: domain Description: GIIM Note: maturase Location: 1 290466-1 290700 bp Feature: domain Description: HNH Note: nucleases Location: 1291027-1291126 bp Feature: domain Description: HNH Note: nucleases Location: 1 291 027-1 291 1 26 bp Feature: gene Location: 1291376-1291864 bp Ori: ADI04009.1 Feature: domain Description: Acetyltransf_1 Location: 1291466-1291781 bp Feature: domain Description: Acetyltransf_1 Location: 1 291 466-1 291 781 bp Feature: gene Location: 1291938-1292945 bp Ori: ADI04010.1 Feature: domain Description: F420_MSMEG_4879 Location: 1292073-1292865 bp Feature: domain Description: F420_MSMEG_4879 Location: 1 292073-1 292865 bp Feature: gene Location: 2005968-2006138 bp Feature: gene Location: 2006410-2006874 bp Feature: gene Location: 2007389-2008738 bp Ori: ADI04584.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2007710-2008400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200771 0-2008400 bp Feature: domain Description: GIIM Note: maturase Location: 2008469-2008676 bp Feature: domain Description: GIIM Note: maturase Location: 2008469-2008676 bp Feature: gene Location: 2009140-2009301 bp Feature: gene Location: 2009588-2010418 bp Ori: ADI04586.1 Feature: domain Description: LpqC Location: 2009648-2010056 bp Feature: domain Description: LpqC Location: 2009648-201 0056 bp Feature: gene Location: 11419237-11420688 bp Ori: ADI12722.1 Feature: domain Description: BaeS Location: 11419672-11420644 bp Feature: domain Description: BaeS Location: 1 1 41 9672-1 1 420644 bp Feature: gene Location: 11420873-11421370 bp Ori: ADI12723.1 Feature: domain Description: HTH_Tnp_4 Location: 11421116-11421260 bp Feature: domain Description: HTH_Tnp_4 Location: 1 1 421 1 1 6-1 1 421 260 bp Feature: gene Location: 11421435-11422865 bp Ori: ADI12724.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11421756-11422440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 421 756-1 1 422440 bp Feature: domain Description: GIIM Note: maturase Location: 11422515-11422743 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 42251 5-1 1 422743 bp Feature: gene Location: 11423431-11424021 bp Ori: ADI12725.1 Feature: domain Description: DDE_Tnp_ISAZ013 Location: 11423437-11423989 bp Feature: domain Description: DDE_Tnp_ISAZ01 3 Location: 1 1 423437-1 1 423989 bp Feature: gene Location: 11424156-11425064 bp Ori: ADI12726.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11424162-11424300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 4241 62-1 1 424300 bp Feature: domain Description: GIIM Note: maturase Location: 11424354-11424585 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 424354-1 1 424585 bp Feature: gene Location: 11425536-11425964 bp Ori: ADI12727.1 Feature: domain Description: DDE_Tnp_ISAZ013 Location: 11425641-11425944 bp Feature: domain Description: DDE_Tnp_ISAZ01 3 Location: 1 1 425641 -1 1 425944 bp Feature: gene Location: 11426237-11428300 bp Ori: ADI12728.1 Feature: domain Description: actII Location: 11426249-11427464 bp Feature: domain Description: actII Location: 1 1 426249-1 1 427464 bp Feature: domain Description: actII Location: 11427641-11428217 bp Feature: domain Description: actII Location: 1 1 427641 -1 1 42821 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjbR (pfam04237), Ggt (COG0405), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), Acetyltransf_1 (pfam00583), F420_MSMEG_4879 (TIGR03564), LpqC (COG3509), BaeS (COG0642)
HTH_Tnp_4 (pfam13613), DDE_Tnp_ISAZ013 (pfam07592), actII (TIGR00833)