myRT

myRT report for GCA_000092545.1_ASM9254v1

Download annotations/find similar RTs

Seq: CP000675.2 Legionella pneumophila str. Corby, complete genome (3576470 bp)
Overview 1 RT 1: 2796512-2808141 bp 2 RT 2: 3073093-3076726 bp Neighborhood of RT #1 [2796512, 2808167] RND_mfp 8a0102 TolC RVT-GII GIIM LomR DUF1566 Avd_like RVT-DGRs DUF772 HTH_XRE S24_LexA-like Neighborhood of RT #2 [3073093, 3076726] DUF4365 RVT-Retrons HTH_XRE Feature: gene Location: 2796512-2797768 bp Ori: ABQ55780.1 Gene: helB Feature: domain Description: RND_mfp Location: 2797001-2797184 bp Feature: domain Description: RND_mfp Location: 2797001 -27971 84 bp Feature: domain Description: 8a0102 Location: 2797187-2797730 bp Feature: domain Description: 8a01 02 Location: 27971 87-2797730 bp Feature: gene Location: 2797765-2799009 bp Ori: ABQ55781.1 Gene: helC Feature: domain Description: TolC Location: 2797858-2798986 bp Feature: domain Description: TolC Location: 2797858-2798986 bp Feature: gene Location: 2799252-2800616 bp Ori: ABQ55782.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2799570-2800227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2799570-2800227 bp Feature: domain Description: GIIM Note: maturase Location: 2800308-2800527 bp Feature: domain Description: GIIM Note: maturase Location: 2800308-2800527 bp Feature: gene Location: 2801200-2801361 bp Feature: gene Location: 2801561-2802310 bp Ori: ABQ55784.1 Feature: domain Description: LomR Location: 2801567-2802239 bp Feature: domain Description: LomR Location: 2801 567-2802239 bp Feature: gene Location: 2802322-2803845 bp Ori: ABQ55785.1 Feature: domain Description: DUF1566 Location: 2803540-2803831 bp Feature: domain Description: DUF1 566 Location: 2803540-2803831 bp Feature: gene Location: 2803977-2804285 bp Ori: ABQ55786.1 Feature: domain Description: Avd_like Location: 2803983-2804265 bp Feature: domain Description: Avd_like Location: 2803983-2804265 bp Feature: gene Location: 2804625-2805824 bp Ori: ABQ55787.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2804844-2805600 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2804844-2805600 bp Feature: gene Location: 2805843-2807303 bp Ori: ABQ55788.1 Feature: domain Description: DUF772 Location: 2806026-2806218 bp Feature: domain Description: DUF772 Location: 2806026-280621 8 bp Feature: gene Location: 2807505-2808167 bp Ori: ABQ55789.1 Feature: domain Description: HTH_XRE Location: 2807535-2807703 bp Feature: domain Description: HTH_XRE Location: 2807535-2807703 bp Feature: domain Description: S24_LexA-like Location: 2807895-2808141 bp Feature: domain Description: S24_LexA-like Location: 2807895-28081 41 bp Feature: gene Location: 3073093-3073788 bp Feature: gene Location: 3073996-3075057 bp Ori: ABQ55828.1 Feature: domain Description: DUF4365 Location: 3074041-3074431 bp Feature: domain Description: DUF4365 Location: 3074041 -3074431 bp Feature: gene Location: 3075325-3076248 bp Ori: ABQ55827.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3075499-3076036 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3075499-3076036 bp Feature: gene Location: 3076229-3076471 bp Ori: ABQ55826.1 Feature: domain Description: HTH_XRE Location: 3076235-3076343 bp Feature: domain Description: HTH_XRE Location: 3076235-3076343 bp Feature: gene Location: 3076562-3076726 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RND_mfp (TIGR01730), 8a0102 (TIGR00999), TolC (COG1538), RVT-GII, GIIM (pfam08388), LomR (COG3637), DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, DUF772 (pfam05598)
HTH_XRE (smart00530), S24_LexA-like (cd06529), DUF4365 (pfam14280), RVT-Retrons