myRT

myRT report for GCA_000093085.1_ASM9308v1

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Seq: CP001791.1 [Bacillus] selenitireducens MLS10 chromosome, complete genome (3592487 bp)
Overview 1 RT 1: 156749-162037 bp 2 RT 2: 420520-426352 bp 3 RT 3: 1876125-1881323 bp 4 RT 4: 1993950-2002008 bp 5 RT 5: 2257120-2261686 bp 6 RT 6: 2890254-2895540 bp Neighborhood of RT #1 [156749, 162093] rplM rpsI RVT-GII GIIM YqiK LdcB Neighborhood of RT #2 [420520, 426381] PRK09415 ubiX_pad RVT-GII GIIM GdhA rrmA Neighborhood of RT #3 [1876125, 1881358] PRK00230 pyrE RVT-GII GIIM MdlB Neighborhood of RT #4 [1993950, 2002028] DHDPS RnjA RVT-GII GIIM FtsK MngR Neighborhood of RT #5 [2257120, 2261686] MFS_LmrB_MDR_like RVT-GII GIIM Neighborhood of RT #6 [2890254, 2896175] Hit DUF2075 RVT-GII GIIM hsdR Feature: gene Location: 156749-157186 bp Ori: ADH97697.1 Feature: domain Description: rplM Location: 156758-157178 bp Feature: domain Description: rplM Location: 1 56758-1 571 78 bp Feature: gene Location: 157207-157599 bp Ori: ADH97698.1 Feature: domain Description: rpsI Location: 157216-157597 bp Feature: domain Description: rpsI Location: 1 5721 6-1 57597 bp Feature: gene Location: 158250-159518 bp Ori: ADH97699.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158451-159066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 58451 -1 59066 bp Feature: domain Description: GIIM Note: maturase Location: 159123-159357 bp Feature: domain Description: GIIM Note: maturase Location: 1 591 23-1 59357 bp Feature: gene Location: 159696-161138 bp Ori: ADH97700.1 Feature: domain Description: YqiK Location: 159708-161085 bp Feature: domain Description: YqiK Location: 1 59708-1 61 085 bp Feature: gene Location: 161299-162093 bp Ori: ADH97701.1 Feature: domain Description: LdcB Location: 161482-162037 bp Feature: domain Description: LdcB Location: 1 61 482-1 62037 bp Feature: gene Location: 420520-421065 bp Ori: ADH97942.1 Feature: domain Description: PRK09415 Location: 420550-421048 bp Feature: domain Description: PRK0941 5 Location: 420550-421 048 bp Feature: gene Location: 421405-421974 bp Ori: ADH97943.1 Feature: domain Description: ubiX_pad Location: 421417-421957 bp Feature: domain Description: ubiX_pad Location: 421 41 7-421 957 bp Feature: gene Location: 422534-423802 bp Ori: ADH97944.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422735-423350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422735-423350 bp Feature: domain Description: GIIM Note: maturase Location: 423407-423641 bp Feature: domain Description: GIIM Note: maturase Location: 423407-423641 bp Feature: gene Location: 423910-425313 bp Ori: ADH97945.1 Feature: domain Description: GdhA Location: 424009-425305 bp Feature: domain Description: GdhA Location: 424009-425305 bp Feature: gene Location: 425476-426381 bp Ori: ADH97946.1 Feature: domain Description: rrmA Location: 425569-426352 bp Feature: domain Description: rrmA Location: 425569-426352 bp Feature: gene Location: 1876125-1876844 bp Ori: ADH99187.1 Feature: domain Description: PRK00230 Location: 1876137-1876824 bp Feature: domain Description: PRK00230 Location: 1 8761 37-1 876824 bp Feature: gene Location: 1876831-1877472 bp Ori: ADH99188.1 Feature: domain Description: pyrE Location: 1876846-1877452 bp Feature: domain Description: pyrE Location: 1 876846-1 877452 bp Feature: gene Location: 1878089-1879357 bp Ori: ADH99189.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1878290-1878905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 878290-1 878905 bp Feature: domain Description: GIIM Note: maturase Location: 1878962-1879196 bp Feature: domain Description: GIIM Note: maturase Location: 1 878962-1 8791 96 bp Feature: gene Location: 1879406-1879588 bp Feature: gene Location: 1879607-1881358 bp Ori: ADH99191.1 Feature: domain Description: MdlB Location: 1879613-1881323 bp Feature: domain Description: MdlB Location: 1 87961 3-1 881 323 bp Feature: gene Location: 1993950-1994828 bp Ori: ADH99305.1 Feature: domain Description: DHDPS Location: 1993959-1994805 bp Feature: domain Description: DHDPS Location: 1 993959-1 994805 bp Feature: gene Location: 1994968-1996638 bp Ori: ADH99306.1 Feature: domain Description: RnjA Location: 1994983-1996630 bp Feature: domain Description: RnjA Location: 1 994983-1 996630 bp Feature: gene Location: 1997221-1998489 bp Ori: ADH99307.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1997422-1998037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 997422-1 998037 bp Feature: domain Description: GIIM Note: maturase Location: 1998094-1998328 bp Feature: domain Description: GIIM Note: maturase Location: 1 998094-1 998328 bp Feature: gene Location: 1998771-2001203 bp Ori: ADH99308.1 Feature: domain Description: FtsK Location: 1999575-2001159 bp Feature: domain Description: FtsK Location: 1 999575-2001 1 59 bp Feature: gene Location: 2001306-2002028 bp Ori: ADH99309.1 Feature: domain Description: MngR Location: 2001318-2002008 bp Feature: domain Description: MngR Location: 2001 31 8-2002008 bp Feature: gene Location: 2257120-2257500 bp Feature: gene Location: 2257572-2259005 bp Ori: ADH99534.1 Feature: domain Description: MFS_LmrB_MDR_like Location: 2257623-2258943 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 2257623-2258943 bp Feature: gene Location: 2259161-2260429 bp Ori: ADH99535.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2259362-2259977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2259362-2259977 bp Feature: domain Description: GIIM Note: maturase Location: 2260034-2260268 bp Feature: domain Description: GIIM Note: maturase Location: 2260034-2260268 bp Feature: gene Location: 2261059-2261361 bp Feature: gene Location: 2261456-2261686 bp Feature: gene Location: 2890254-2890622 bp Ori: ADI00158.1 Feature: domain Description: Hit Location: 2890266-2890611 bp Feature: domain Description: Hit Location: 2890266-289061 1 bp Feature: gene Location: 2890708-2892549 bp Ori: ADI00159.1 Feature: domain Description: DUF2075 Location: 2891509-2892520 bp Feature: domain Description: DUF2075 Location: 2891 509-2892520 bp Feature: gene Location: 2892888-2894156 bp Ori: ADI00160.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2893089-2893704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2893089-2893704 bp Feature: domain Description: GIIM Note: maturase Location: 2893761-2893995 bp Feature: domain Description: GIIM Note: maturase Location: 2893761 -2893995 bp Feature: gene Location: 2894762-2894992 bp Feature: gene Location: 2894982-2896175 bp Ori: ADI00162.1 Feature: domain Description: hsdR Location: 2895003-2895540 bp Feature: domain Description: hsdR Location: 2895003-2895540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT-GII, GIIM (pfam08388), YqiK (COG2268), LdcB (COG1876), PRK09415 (RNA polymerase factor sigma C; Reviewed), ubiX_pad (TIGR00421), GdhA (COG0334), rrmA (PRK11088)
PRK00230 (orotidine-5'-phosphate decarboxylase), pyrE (TIGR00336), MdlB (COG1132), DHDPS (pfam00701), RnjA (COG0595), FtsK (COG1674), MngR (COG2188), MFS_LmrB_MDR_like (cd17503), Hit (COG0537), DUF2075 (pfam09848)
hsdR (TIGR00348)