myRT

myRT report for GCA_000143225.1_ASM14322v1

Download annotations/find similar RTs

Seq: CP002039.1 Herbaspirillum seropedicae SmR1, complete genome (5513887 bp)
Overview 1 RT 1: 6198-13753 bp 2 RT 2: 3295166-3301272 bp Neighborhood of RT #1 [6198, 13761] RVT-UG5 PRK06148 Neighborhood of RT #2 [3295166, 3301272] NirB MopB_Nitrate-R-NapA-like formate-DH-alph NirB RVT-Retrons HTH_XRE Feature: gene Location: 6198-7127 bp Feature: gene Location: 7184-8122 bp Feature: gene Location: 8177-11245 bp Ori: ADJ61536.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8684-9161 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8684-91 61 bp Feature: gene Location: 11346-12347 bp Feature: gene Location: 12433-13761 bp Ori: ADJ61538.1 Gene: gabT Feature: domain Description: PRK06148 Location: 12496-13753 bp Feature: domain Description: PRK061 48 Location: 1 2496-1 3753 bp Feature: gene Location: 3295166-3296407 bp Ori: ADJ64391.1 Feature: domain Description: NirB Location: 3295199-3296390 bp Feature: domain Description: NirB Location: 32951 99-3296390 bp Feature: gene Location: 3296449-3299217 bp Ori: ADJ64392.1 Gene: nasA Feature: domain Description: MopB_Nitrate-R-NapA-like Location: 3296500-3298231 bp Feature: domain Description: MopB_Nitrate-R-NapA-like Location: 3296500-3298231 bp Feature: domain Description: formate-DH-alph Location: 3298255-3298615 bp Feature: domain Description: formate-DH-alph Location: 3298255-329861 5 bp Feature: domain Description: NirB Location: 3298798-3299182 bp Feature: domain Description: NirB Location: 3298798-32991 82 bp Feature: gene Location: 3299680-3300714 bp Ori: ADJ64393.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3299824-3300388 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3299824-3300388 bp Feature: gene Location: 3300704-3300994 bp Ori: ADJ64394.1 Feature: domain Description: HTH_XRE Location: 3300716-3300884 bp Feature: domain Description: HTH_XRE Location: 330071 6-3300884 bp Feature: gene Location: 3301039-3301272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, PRK06148 (hypothetical protein; Provisional), NirB (COG1251), MopB_Nitrate-R-NapA-like (cd02754), formate-DH-alph (TIGR01553), RVT-Retrons, HTH_XRE (smart00530)