myRT

myRT report for GCA_000143435.1_ASM14343v1

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Seq: CP002034.1 Lactobacillus salivarius CECT 5713, complete genome (1828169 bp)
Overview 1 RT 1: 56777-64026 bp Neighborhood of RT #1 [56777, 64031] InsE InsE PHA02517 RVT-GII GIIM MATE_MepA_like Uup ABC_Metallic_Cations ABCF_EF-3 Feature: gene Location: 56777-57295 bp Ori: ADJ78395.1 Feature: domain Description: InsE Location: 56783-56909 bp Feature: domain Description: InsE Location: 56783-56909 bp Feature: domain Description: InsE Location: 56951-57287 bp Feature: domain Description: InsE Location: 56951 -57287 bp Feature: gene Location: 57298-57948 bp Ori: ADJ78396.1 Feature: domain Description: PHA02517 Location: 57403-57928 bp Feature: domain Description: PHA0251 7 Location: 57403-57928 bp Feature: gene Location: 59584-60969 bp Ori: ADJ78397.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59905-60523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59905-60523 bp Feature: domain Description: GIIM Note: maturase Location: 60577-60799 bp Feature: domain Description: GIIM Note: maturase Location: 60577-60799 bp Feature: gene Location: 61175-62497 bp Ori: ADJ78398.1 Feature: domain Description: MATE_MepA_like Location: 61202-62468 bp Feature: domain Description: MATE_MepA_like Location: 61 202-62468 bp Feature: gene Location: 62550-64031 bp Ori: ADJ78399.1 Feature: domain Description: Uup Location: 62553-62859 bp Feature: domain Description: Uup Location: 62553-62859 bp Feature: domain Description: ABC_Metallic_Cations Location: 62883-63120 bp Feature: domain Description: ABC_Metallic_Cations Location: 62883-631 20 bp Feature: domain Description: ABCF_EF-3 Location: 63468-64026 bp Feature: domain Description: ABCF_EF-3 Location: 63468-64026 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), MATE_MepA_like (cd13143), Uup (COG0488), ABC_Metallic_Cations (cd03235), ABCF_EF-3 (cd03221)