myRT

myRT report for GCA_000143605.1_ASM14360v1

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Seq: CP001746.1 Bacillus cereus biovar anthracis str. CI, complete genome (5196054 bp)
Overview 1 RT 1: 4903373-4907354 bp 2 RT 2: 5163702-5167781 bp Neighborhood of RT #1 [4903373, 4907377] PRK10420 DDE_Tnp_ISL3 RVT-GII PRK10420 DUF4870 Neighborhood of RT #2 [5163702, 5167810] BcsQ RVT-UG2 tRNA_RlmH_YbeA YyzF Feature: gene Location: 4903373-4903696 bp Ori: ADK07761.1 Feature: domain Description: PRK10420 Location: 4903385-4903694 bp Feature: domain Description: PRK1 0420 Location: 4903385-4903694 bp Feature: gene Location: 4903633-4904181 bp Ori: ADK07762.1 Feature: domain Description: DDE_Tnp_ISL3 Location: 4903672-4904086 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 4903672-4904086 bp Feature: gene Location: 4904673-4904912 bp Ori: ADK07763.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4904730-4904850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4904730-4904850 bp Feature: gene Location: 4905104-4906762 bp Ori: ADK07764.1 Gene: lldP2 Feature: domain Description: PRK10420 Location: 4905107-4906760 bp Feature: domain Description: PRK1 0420 Location: 49051 07-4906760 bp Feature: gene Location: 4907060-4907377 bp Ori: ADK07765.1 Feature: domain Description: DUF4870 Location: 4907078-4907354 bp Feature: domain Description: DUF4870 Location: 4907078-4907354 bp Feature: gene Location: 5163702-5164088 bp Feature: gene Location: 5164104-5165045 bp Ori: ADK08004.1 Feature: domain Description: BcsQ Location: 5164107-5165025 bp Feature: domain Description: BcsQ Location: 51 641 07-51 65025 bp Feature: gene Location: 5165211-5166503 bp Ori: ADK08005.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 5165385-5166204 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 51 65385-51 66204 bp Feature: gene Location: 5167086-5167619 bp Ori: ADK08006.1 Feature: domain Description: tRNA_RlmH_YbeA Location: 5167146-5167617 bp Feature: domain Description: tRNA_RlmH_YbeA Location: 51 671 46-51 6761 7 bp Feature: gene Location: 5167625-5167810 bp Ori: ADK08007.1 Feature: domain Description: YyzF Location: 5167640-5167781 bp Feature: domain Description: YyzF Location: 51 67640-51 67781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10420 (L-lactate permease; Provisional), DDE_Tnp_ISL3 (pfam01610), RVT-GII, DUF4870 (pfam09685), BcsQ (COG1192), RVT-UG2, tRNA_RlmH_YbeA (TIGR00246), YyzF (pfam14116)

Seq: CP001747.1 Bacillus cereus biovar anthracis str. CI plasmid pCI-XO1, complete sequence (181907 bp)
Overview 1 RT 1: 5174-10982 bp 2 RT 2: 30216-34269 bp Neighborhood of RT #1 [5174, 11773] RVT_N RVT-GII GIIM HNH DEXHc_Snf DEXHc_Snf Neighborhood of RT #2 [30216, 34292] PRK06850 HEPN RVT-GII NT_KNTase_like Feature: gene Location: 5174-5887 bp Feature: gene Location: 5904-6611 bp Feature: gene Location: 6728-8536 bp Ori: ADK08047.1 Feature: domain Description: RVT_N Location: 6779-7019 bp Feature: domain Description: RVT_N Location: 6779-7019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7079-7733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7079-7733 bp Feature: domain Description: GIIM Note: maturase Location: 7796-8030 bp Feature: domain Description: GIIM Note: maturase Location: 7796-8030 bp Feature: domain Description: HNH Note: nucleases Location: 8270-8405 bp Feature: domain Description: HNH Note: nucleases Location: 82 70-8405 bp Feature: gene Location: 9041-9133 bp Feature: gene Location: 9140-11773 bp Ori: ADK08049.1 Feature: domain Description: DEXHc_Snf Location: 9974-10337 bp Feature: domain Description: DEXHc_Snf Location: 9974-10337 bp Feature: domain Description: DEXHc_Snf Location: 10703-10982 bp Feature: domain Description: DEXHc_Snf Location: 10703-10982 bp Feature: gene Location: 30216-30521 bp Ori: ADK08068.1 Feature: domain Description: PRK06850 Location: 30255-30519 bp Feature: domain Description: PRK06850 Location: 302 55-30519 bp Feature: gene Location: 30615-31058 bp Ori: ADK08069.1 Feature: domain Description: HEPN Location: 30669-31017 bp Feature: domain Description: HEPN Location: 30669-31017 bp Feature: gene Location: 31204-33135 bp Ori: ADK08070.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31525-32260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3152 5-32 2 60 bp Feature: gene Location: 33132-33335 bp Feature: gene Location: 33894-34292 bp Ori: ADK08072.1 Feature: domain Description: NT_KNTase_like Location: 33969-34269 bp Feature: domain Description: NT_KNTase_like Location: 33969-342 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), DEXHc_Snf (cd17919), PRK06850 (hypothetical protein; Provisional), HEPN (smart00748), NT_KNTase_like (cd05403)