myRT

myRT report for GCA_000147695.3_ASM14769v3

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Seq: CP002991.1 Thermoanaerobacter wiegelii Rt8.B1, complete genome (2785056 bp)
Overview 1 RT 1: 49163-53465 bp 2 RT 2: 379702-383885 bp 3 RT 3: 508216-514061 bp 4 RT 4: 684092-691503 bp 5 RT 5: 1620995-1625942 bp 6 RT 6: 2731600-2739729 bp Neighborhood of RT #1 [49163, 53465] CstA CstA RVT-GII GIIM Neighborhood of RT #2 [379702, 383908] HTH_24 YeiC_kinase_like PsuG RVT-GII GIIM SASP_tlp Neighborhood of RT #3 [508216, 514417] M42_Frv M42_Frv RVT-GII GIIM DUF5643 DUF5643 Neighborhood of RT #4 [684092, 691505] groES groEL RVT-GII GIIM PRK05567 guaA Neighborhood of RT #5 [1620995, 1625950] NifS CsoR-like_DUF156 RVT-GII GIIM ferrit_encaps Neighborhood of RT #6 [2731600, 2739758] CoA_CoA_reduc PGA_cap RVT-GII GIIM PGM2 M3B_PepF Feature: gene Location: 49163-49531 bp Feature: gene Location: 49566-51200 bp Ori: AEM77563.1 Feature: domain Description: CstA Location: 49575-50613 bp Feature: domain Description: CstA Location: 49575-5061 3 bp Feature: domain Description: CstA Location: 50700-51189 bp Feature: domain Description: CstA Location: 50700-51 1 89 bp Feature: gene Location: 51676-53088 bp Ori: AEM77564.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52024-52642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52024-52642 bp Feature: domain Description: GIIM Note: maturase Location: 52693-52918 bp Feature: domain Description: GIIM Note: maturase Location: 52693-5291 8 bp Feature: gene Location: 53202-53465 bp Feature: gene Location: 379702-380805 bp Ori: AEM77846.1 Feature: domain Description: HTH_24 Location: 379714-379849 bp Feature: domain Description: HTH_24 Location: 37971 4-379849 bp Feature: domain Description: YeiC_kinase_like Location: 379888-380737 bp Feature: domain Description: YeiC_kinase_like Location: 379888-380737 bp Feature: gene Location: 380802-381725 bp Ori: AEM77847.1 Feature: domain Description: PsuG Location: 380808-381711 bp Feature: domain Description: PsuG Location: 380808-381 71 1 bp Feature: gene Location: 382165-383442 bp Ori: AEM77848.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382513-383131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38251 3-3831 31 bp Feature: domain Description: GIIM Note: maturase Location: 383182-383407 bp Feature: domain Description: GIIM Note: maturase Location: 3831 82-383407 bp Feature: gene Location: 383441-383575 bp Feature: gene Location: 383639-383908 bp Ori: AEM77849.1 Feature: domain Description: SASP_tlp Location: 383675-383885 bp Feature: domain Description: SASP_tlp Location: 383675-383885 bp Feature: gene Location: 508216-509235 bp Ori: AEM77960.1 Feature: domain Description: M42_Frv Location: 508222-509206 bp Feature: domain Description: M42_Frv Location: 508222-509206 bp Feature: gene Location: 509232-510215 bp Ori: AEM77961.1 Feature: domain Description: M42_Frv Location: 509250-510204 bp Feature: domain Description: M42_Frv Location: 509250-51 0204 bp Feature: gene Location: 510677-512083 bp Ori: AEM77962.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 511025-511643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 1 025-51 1 643 bp Feature: domain Description: GIIM Note: maturase Location: 511694-511919 bp Feature: domain Description: GIIM Note: maturase Location: 51 1 694-51 1 91 9 bp Feature: gene Location: 513099-513323 bp Feature: gene Location: 513323-514417 bp Ori: AEM77963.1 Feature: domain Description: DUF5643 Location: 513383-513605 bp Feature: domain Description: DUF5643 Location: 51 3383-51 3605 bp Feature: domain Description: DUF5643 Location: 513743-514061 bp Feature: domain Description: DUF5643 Location: 51 3743-51 4061 bp Feature: gene Location: 684092-684376 bp Ori: AEM78116.1 Feature: domain Description: groES Location: 684095-684374 bp Feature: domain Description: groES Location: 684095-684374 bp Feature: gene Location: 684391-686016 bp Ori: AEM78117.1 Feature: domain Description: groEL Location: 684394-686005 bp Feature: domain Description: groEL Location: 684394-686005 bp Feature: gene Location: 686671-688083 bp Ori: AEM78118.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 687019-687637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68701 9-687637 bp Feature: domain Description: GIIM Note: maturase Location: 687688-687913 bp Feature: domain Description: GIIM Note: maturase Location: 687688-68791 3 bp Feature: gene Location: 688497-689951 bp Ori: AEM78119.1 Feature: domain Description: PRK05567 Location: 688509-689946 bp Feature: domain Description: PRK05567 Location: 688509-689946 bp Feature: gene Location: 689967-691505 bp Ori: AEM78120.1 Feature: domain Description: guaA Location: 689982-691503 bp Feature: domain Description: guaA Location: 689982-691 503 bp Feature: gene Location: 1620995-1622146 bp Ori: AEM79025.1 Feature: domain Description: NifS Location: 1620998-1622135 bp Feature: domain Description: NifS Location: 1 620998-1 6221 35 bp Feature: gene Location: 1622165-1622431 bp Ori: AEM79026.1 Feature: domain Description: CsoR-like_DUF156 Location: 1622186-1622417 bp Feature: domain Description: CsoR-like_DUF1 56 Location: 1 6221 86-1 62241 7 bp Feature: gene Location: 1622594-1624000 bp Ori: AEM79027.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1622942-1623560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 622942-1 623560 bp Feature: domain Description: GIIM Note: maturase Location: 1623611-1623836 bp Feature: domain Description: GIIM Note: maturase Location: 1 62361 1 -1 623836 bp Feature: gene Location: 1624449-1625159 bp Feature: gene Location: 1625639-1625950 bp Ori: AEM79029.1 Feature: domain Description: ferrit_encaps Location: 1625663-1625942 bp Feature: domain Description: ferrit_encaps Location: 1 625663-1 625942 bp Feature: gene Location: 2731600-2732955 bp Ori: AEM79995.1 Feature: domain Description: CoA_CoA_reduc Location: 2731648-2732926 bp Feature: domain Description: CoA_CoA_reduc Location: 2731 648-2732926 bp Feature: gene Location: 2733042-2734127 bp Ori: AEM79996.1 Feature: domain Description: PGA_cap Location: 2733234-2733909 bp Feature: domain Description: PGA_cap Location: 2733234-2733909 bp Feature: gene Location: 2734267-2735679 bp Ori: AEM79997.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2734615-2735233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273461 5-2735233 bp Feature: domain Description: GIIM Note: maturase Location: 2735284-2735509 bp Feature: domain Description: GIIM Note: maturase Location: 2735284-2735509 bp Feature: gene Location: 2736148-2737824 bp Ori: AEM79998.1 Feature: domain Description: PGM2 Location: 2736280-2737798 bp Feature: domain Description: PGM2 Location: 2736280-2737798 bp Feature: gene Location: 2737947-2739758 bp Ori: AEM79999.1 Feature: domain Description: M3B_PepF Location: 2737971-2739729 bp Feature: domain Description: M3B_PepF Location: 2737971 -2739729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CstA (pfam02554), RVT-GII, GIIM (pfam08388), HTH_24 (pfam13412), YeiC_kinase_like (cd01941), PsuG (COG2313), SASP_tlp (TIGR03090), M42_Frv (cd05656), DUF5643 (pfam18705), groES (PRK14533)
groEL (PRK12852), PRK05567 (inosine 5'-monophosphate dehydrogenase; Reviewed), guaA (PRK00074), NifS (COG1104), CsoR-like_DUF156 (cl00846), ferrit_encaps (TIGR04535), CoA_CoA_reduc (TIGR03385), PGA_cap (smart00854), PGM2 (cd05799), M3B_PepF (cd09610)