myRT

myRT report for GCA_000147775.3_ASM14777v3

Download annotations/find similar RTs

Seq: CP002742.1 Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence (1690594 bp)
Overview 1 RT 1: 30371-35579 bp 2 RT 2: 186380-193122 bp 3 RT 3: 402825-407451 bp 4 RT 4: 1574432-1579148 bp Neighborhood of RT #1 [30371, 35581] PucL PRK03606 RVT-GII GIIM COG3335 HiuH Neighborhood of RT #2 [186380, 193139] MglA PBP1_YtfQ_like RVT-GII GIIM COG3335 PRK12458 Neighborhood of RT #3 [402825, 407459] HTH_ARSR AraJ RVT-GII GIIM PRK09356 Neighborhood of RT #4 [1574432, 1579148] DUF982 RVT-GII GIIM fabG Feature: gene Location: 30371-30874 bp Ori: AEG07817.1 Feature: domain Description: PucL Location: 30377-30863 bp Feature: domain Description: PucL Location: 30377-30863 bp Feature: gene Location: 30971-31483 bp Ori: AEG07818.1 Feature: domain Description: PRK03606 Location: 30980-31448 bp Feature: domain Description: PRK03606 Location: 30980-31 448 bp Feature: gene Location: 33107-34366 bp Ori: AEG07819.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33323-33977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33323-33977 bp Feature: domain Description: GIIM Note: maturase Location: 34058-34280 bp Feature: domain Description: GIIM Note: maturase Location: 34058-34280 bp Feature: gene Location: 34420-34935 bp Ori: AEG07820.1 Feature: domain Description: COG3335 Location: 34540-34924 bp Feature: domain Description: COG3335 Location: 34540-34924 bp Feature: gene Location: 35219-35581 bp Ori: AEG07821.1 Feature: domain Description: HiuH Location: 35225-35579 bp Feature: domain Description: HiuH Location: 35225-35579 bp Feature: gene Location: 186380-187897 bp Ori: AEG07950.1 Feature: domain Description: MglA Location: 186389-187871 bp Feature: domain Description: MglA Location: 1 86389-1 87871 bp Feature: gene Location: 188040-189002 bp Ori: AEG07951.1 Feature: domain Description: PBP1_YtfQ_like Location: 188121-188946 bp Feature: domain Description: PBP1 _YtfQ_like Location: 1 881 21 -1 88946 bp Feature: gene Location: 190207-191466 bp Ori: AEG07952.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190423-191077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 90423-1 91 077 bp Feature: domain Description: GIIM Note: maturase Location: 191158-191380 bp Feature: domain Description: GIIM Note: maturase Location: 1 91 1 58-1 91 380 bp Feature: gene Location: 191520-192035 bp Ori: AEG07953.1 Feature: domain Description: COG3335 Location: 191640-192024 bp Feature: domain Description: COG3335 Location: 1 91 640-1 92024 bp Feature: gene Location: 192093-193139 bp Ori: AEG07954.1 Feature: domain Description: PRK12458 Location: 192114-193122 bp Feature: domain Description: PRK1 2458 Location: 1 921 1 4-1 931 22 bp Feature: gene Location: 402825-403196 bp Ori: AEG08135.1 Feature: domain Description: HTH_ARSR Location: 402882-403080 bp Feature: domain Description: HTH_ARSR Location: 402882-403080 bp Feature: gene Location: 403286-404470 bp Ori: AEG08136.1 Feature: domain Description: AraJ Location: 403289-404447 bp Feature: domain Description: AraJ Location: 403289-404447 bp Feature: gene Location: 404705-406009 bp Ori: AEG08137.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404975-405590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404975-405590 bp Feature: domain Description: GIIM Note: maturase Location: 405644-405860 bp Feature: domain Description: GIIM Note: maturase Location: 405644-405860 bp Feature: gene Location: 405962-406129 bp Feature: gene Location: 406212-407459 bp Ori: AEG08139.1 Feature: domain Description: PRK09356 Location: 406248-407451 bp Feature: domain Description: PRK09356 Location: 406248-407451 bp Feature: gene Location: 1574432-1574692 bp Ori: AEG09185.1 Feature: domain Description: DUF982 Location: 1574465-1574672 bp Feature: domain Description: DUF982 Location: 1 574465-1 574672 bp Feature: gene Location: 1574736-1575038 bp Feature: gene Location: 1575815-1577176 bp Ori: AEG09187.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1576142-1576757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5761 42-1 576757 bp Feature: domain Description: GIIM Note: maturase Location: 1576811-1577027 bp Feature: domain Description: GIIM Note: maturase Location: 1 57681 1 -1 577027 bp Feature: gene Location: 1577998-1578780 bp Ori: AEG09188.1 Feature: domain Description: fabG Location: 1578016-1578766 bp Feature: domain Description: fabG Location: 1 57801 6-1 578766 bp Feature: gene Location: 1578777-1579148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PucL (COG3195), PRK03606 (ureidoglycolate lyase), RVT-GII, GIIM (pfam08388), COG3335 (Transposase ), HiuH (COG2351), MglA (COG1129), PBP1_YtfQ_like, PRK12458 (glutathione synthetase; Provisional), HTH_ARSR (smart00418)
AraJ (COG2814), PRK09356 (imidazolonepropionase; Validated), DUF982 (pfam06169), fabG (PRK12825)

Seq: CP002741.1 Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence (1616209 bp)
Overview 1 RT 1: 658618-663938 bp Neighborhood of RT #1 [658618, 663955] RVT-GII GIIM COG3335 COG3900 Feature: gene Location: 658618-658929 bp Feature: gene Location: 659070-659231 bp Feature: gene Location: 660441-661700 bp Ori: AEG06962.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 660657-661311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 660657-661311 bp Feature: domain Description: GIIM Note: maturase Location: 661392-661614 bp Feature: domain Description: GIIM Note: maturase Location: 661392 -661614 bp Feature: gene Location: 661754-662269 bp Ori: AEG06963.1 Feature: domain Description: COG3335 Location: 661874-662258 bp Feature: domain Description: COG3335 Location: 661874-662 2 58 bp Feature: gene Location: 662693-663955 bp Ori: AEG06964.1 Feature: domain Description: COG3900 Location: 663158-663938 bp Feature: domain Description: COG3900 Location: 663158-663938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3335 (Transposase ), COG3900 (Predicted periplasmic protein )

Seq: CP002740.1 Sinorhizobium meliloti BL225C, complete genome (3671982 bp)
Overview 1 RT 1: 663756-669870 bp 2 RT 2: 1000240-1006103 bp Neighborhood of RT #1 [663756, 669914] MrcB YcgN RVT-GII GIIM COG3335 YjbR Neighborhood of RT #2 [1000240, 1006103] DsbG PRK08960 RVT-GII GIIM COG3335 Feature: gene Location: 663756-665969 bp Ori: AEG03564.1 Feature: domain Description: MrcB Location: 663921-665781 bp Feature: domain Description: MrcB Location: 663 921-665781 bp Feature: gene Location: 666111-666578 bp Ori: AEG03565.1 Feature: domain Description: YcgN Location: 666117-666552 bp Feature: domain Description: YcgN Location: 666117-666552 bp Feature: gene Location: 667673-668932 bp Ori: AEG03566.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 667889-668543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 667889-668543 bp Feature: domain Description: GIIM Note: maturase Location: 668624-668846 bp Feature: domain Description: GIIM Note: maturase Location: 668624-668846 bp Feature: gene Location: 668986-669501 bp Ori: AEG03567.1 Feature: domain Description: COG3335 Location: 669106-669490 bp Feature: domain Description: COG3 3 3 5 Location: 669106-669490 bp Feature: gene Location: 669579-669914 bp Ori: AEG03568.1 Feature: domain Description: YjbR Location: 669612-669870 bp Feature: domain Description: YjbR Location: 669612-669870 bp Feature: gene Location: 1000240-1001007 bp Ori: AEG03878.1 Feature: domain Description: DsbG Location: 1000279-1000984 bp Feature: domain Description: DsbG Location: 1000279-1000984 bp Feature: gene Location: 1001236-1002393 bp Ori: AEG03879.1 Feature: domain Description: PRK08960 Location: 1001248-1002388 bp Feature: domain Description: PRK08960 Location: 1001248-10023 88 bp Feature: gene Location: 1003488-1004747 bp Ori: AEG03880.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1003704-1004358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1003 704-10043 58 bp Feature: domain Description: GIIM Note: maturase Location: 1004439-1004661 bp Feature: domain Description: GIIM Note: maturase Location: 100443 9-1004661 bp Feature: gene Location: 1004801-1005316 bp Ori: AEG03881.1 Feature: domain Description: COG3335 Location: 1004921-1005305 bp Feature: domain Description: COG3 3 3 5 Location: 1004921-10053 05 bp Feature: gene Location: 1005888-1006103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MrcB (COG0744), YcgN (COG2983), RVT-GII, GIIM (pfam08388), COG3335 (Transposase ), YjbR (pfam04237), DsbG (COG1651), PRK08960 (pyridoxal phosphate-dependent aminotransferase)