myRT

myRT report for GCA_000147795.3_ASM14779v3

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Seq: CP002783.1 Sinorhizobium meliloti AK83 chromosome 3, complete sequence (1312480 bp)
Overview 1 RT 1: 1116809-1127082 bp Neighborhood of RT #1 [1116809, 1127177] RutF RVT-GII Transposase_mut DUF772 DDE_Tnp_1 RVT-GII GIIM InsE TnpB_IS66 Feature: gene Location: 1116809-1117153 bp Feature: gene Location: 1117802-1118887 bp Ori: AEG57861.1 Feature: domain Description: RutF Location: 1118228-1118675 bp Feature: domain Description: RutF Location: 1 1 1 8228-1 1 1 8675 bp Feature: gene Location: 1120408-1121817 bp Ori: AEG57862.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1120762-1121449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 20762-1 1 21 449 bp Feature: gene Location: 1122277-1122798 bp Ori: AEG57863.1 Feature: domain Description: Transposase_mut Location: 1122343-1122712 bp Feature: domain Description: Transposase_mut Location: 1 1 22343-1 1 2271 2 bp Feature: gene Location: 1122767-1124164 bp Ori: AEG57864.1 Feature: domain Description: DUF772 Location: 1122926-1123145 bp Feature: domain Description: DUF772 Location: 1 1 22926-1 1 231 45 bp Feature: domain Description: DDE_Tnp_1 Location: 1123364-1124036 bp Feature: domain Description: DDE_Tnp_1 Location: 1 1 23364-1 1 24036 bp Feature: gene Location: 1124577-1126094 bp Ori: AEG57865.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1124880-1125642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 24880-1 1 25642 bp Feature: domain Description: GIIM Note: maturase Location: 1125711-1125981 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 2571 1 -1 1 25981 bp Feature: gene Location: 1126328-1126786 bp Ori: AEG57866.1 Feature: domain Description: InsE Location: 1126373-1126547 bp Feature: domain Description: InsE Location: 1 1 26373-1 1 26547 bp Feature: gene Location: 1126767-1127177 bp Ori: AEG57867.1 Feature: domain Description: TnpB_IS66 Location: 1126794-1127082 bp Feature: domain Description: TnpB_IS66 Location: 1 1 26794-1 1 27082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RutF (TIGR03615), RVT-GII, Transposase_mut (pfam00872), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609), GIIM (pfam08388), InsE (COG2963), TnpB_IS66 (pfam05717)

Seq: CP002782.1 Sinorhizobium meliloti AK83 chromosome 2, complete sequence (1680879 bp)
Overview 1 RT 1: 1250304-1255221 bp Neighborhood of RT #1 [1250304, 1255229] HTH_ARSR AraJ RVT-GII GIIM PRK09356 Feature: gene Location: 1250304-1250675 bp Ori: AEG56528.1 Feature: domain Description: HTH_ARSR Location: 1250361-1250559 bp Feature: domain Description: HTH_ARSR Location: 12 50361-12 50559 bp Feature: gene Location: 1250765-1251949 bp Ori: AEG56529.1 Feature: domain Description: AraJ Location: 1250768-1251926 bp Feature: domain Description: AraJ Location: 12 50768-12 5192 6 bp Feature: gene Location: 1252418-1253779 bp Ori: AEG56530.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1252745-1253360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 52 745-12 53360 bp Feature: domain Description: GIIM Note: maturase Location: 1253414-1253630 bp Feature: domain Description: GIIM Note: maturase Location: 12 53414-12 53630 bp Feature: gene Location: 1253732-1253899 bp Feature: gene Location: 1253982-1255229 bp Ori: AEG56532.1 Feature: domain Description: PRK09356 Location: 1254018-1255221 bp Feature: domain Description: PRK09356 Location: 12 54018-12 552 2 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), AraJ (COG2814), RVT-GII, GIIM (pfam08388), PRK09356 (imidazolonepropionase; Validated)

Seq: CP002784.1 Sinorhizobium meliloti AK83 plasmid pSINME01, complete sequence (256269 bp)
Overview 1 RT 1: 8960-13854 bp Neighborhood of RT #1 [8960, 13928] RVT-GII PRK13034 ddl Feature: gene Location: 8960-9952 bp Ori: AEG58035.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9176-9830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9176-983 0 bp Feature: gene Location: 11291-12589 bp Ori: AEG58036.1 Feature: domain Description: PRK13034 Location: 11309-12560 bp Feature: domain Description: PRK13 03 4 Location: 113 09-12560 bp Feature: gene Location: 12963-13928 bp Ori: AEG58037.1 Feature: domain Description: ddl Location: 13017-13854 bp Feature: domain Description: ddl Location: 13 017-13 854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK13034 (serine hydroxymethyltransferase; Reviewed), ddl (PRK01966)